4055753 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 secondary 55753 + 0 supplementary 6987 + 0 duplicates 3701566 + 0 mapped (91.27% : N/A) 4000000 + 0 paired in sequencing 2000000 + 0 read1 2000000 + 0 read2 3436318 + 0 properly paired (85.91% : N/A) 3630386 + 0 with itself and mate mapped 15427 + 0 singletons (0.39% : N/A) 156096 + 0 with mate mapped to a different chr 88657 + 0 with mate mapped to a different chr (mapQ>=5)