4059871 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 secondary 59871 + 0 supplementary 7753 + 0 duplicates 2656916 + 0 mapped (65.44% : N/A) 4000000 + 0 paired in sequencing 2000000 + 0 read1 2000000 + 0 read2 2329484 + 0 properly paired (58.24% : N/A) 2572306 + 0 with itself and mate mapped 24739 + 0 singletons (0.62% : N/A) 211542 + 0 with mate mapped to a different chr 127352 + 0 with mate mapped to a different chr (mapQ>=5)