# This file was produced by samtools stats (1.10+htslib-1.10) and can be plotted using plot-bamstats # This file contains statistics for all reads. # The command line was: stats --reference data/reference/Pf3D7_v3.fa.gz results/aligned/QG0049-C.bam # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow) CHK 48bfb720 40f04886 e5e4fdb2 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part. SN raw total sequences: 4000000 SN filtered sequences: 0 SN sequences: 4000000 SN is sorted: 1 SN 1st fragments: 2000000 SN last fragments: 2000000 SN reads mapped: 2597045 SN reads mapped and paired: 2572306 # paired-end technology bit set + both mates mapped SN reads unmapped: 1402955 SN reads properly paired: 2329484 # proper-pair bit set SN reads paired: 4000000 # paired-end technology bit set SN reads duplicated: 7753 # PCR or optical duplicate bit set SN reads MQ0: 163530 # mapped and MQ=0 SN reads QC failed: 0 SN non-primary alignments: 0 SN total length: 400000000 # ignores clipping SN total first fragment length: 200000000 # ignores clipping SN total last fragment length: 200000000 # ignores clipping SN bases mapped: 259704500 # ignores clipping SN bases mapped (cigar): 251545743 # more accurate SN bases trimmed: 0 SN bases duplicated: 775300 SN mismatches: 2508658 # from NM fields SN error rate: 9.972969e-03 # mismatches / bases mapped (cigar) SN average length: 100 SN average first fragment length: 100 SN average last fragment length: 100 SN maximum length: 100 SN maximum first fragment length: 100 SN maximum last fragment length: 100 SN average quality: 34.4 SN insert size average: 222.1 SN insert size standard deviation: 61.8 SN inward oriented pairs: 1169897 SN outward oriented pairs: 8590 SN pairs with other orientation: 7525 SN pairs on different chromosomes: 105771 SN percentage of properly paired reads (%): 58.2 # First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part. # Columns correspond to qualities and rows to cycles. First column is the cycle number. FFQ 1 177 0 0 0 0 0 0 0 0 0 20966 0 0 0 0 0 18900 0 0 44 0 0 2342 13000 0 13910 28968 38806 29095 0 146693 694512 0 132645 859942 0 0 0 0 0 0 0 0 FFQ 2 0 0 0 0 0 0 0 0 0 0 12311 0 0 0 0 0 19307 0 0 222 0 0 3703 9897 0 18643 24845 41242 29713 0 128870 644092 0 81862 985293 0 0 0 0 0 0 0 0 FFQ 3 0 0 0 0 0 0 0 0 0 0 3270 0 0 0 0 0 10198 0 0 69 0 0 2992 7682 0 15235 22143 39656 30830 0 131657 632594 0 76767 1026907 0 0 0 0 0 0 0 0 FFQ 4 109 0 0 0 0 0 0 0 0 0 7478 0 0 0 0 0 5685 0 0 4373 0 0 3641 0 0 8578 13028 915 18180 350 29931 747 44367 71129 0 513946 0 1277543 0 0 0 0 0 FFQ 5 0 0 0 0 0 0 0 0 0 0 4022 0 0 0 0 0 5027 0 0 4569 0 0 3673 0 0 9223 14428 903 19722 437 33981 713 46294 74139 0 507066 0 1275803 0 0 0 0 0 FFQ 6 0 0 0 0 0 0 1 0 539 0 2104 1482 0 0 0 496 1083 3429 1472 2917 0 516 233 4386 1 10525 12293 2284 10530 8268 32228 6258 51001 64024 1 466210 37113 1280606 0 0 0 0 0 FFQ 7 0 0 0 0 0 0 1 0 596 0 2570 1610 0 0 0 572 1203 4023 1520 2954 1 551 210 4507 0 11079 12834 2729 10584 8190 33299 6315 50898 63960 3 462521 36892 1280378 0 0 0 0 0 FFQ 8 0 0 0 0 0 1 0 0 692 0 2493 1490 0 0 2 678 1143 4162 1502 2718 1 597 201 4401 2 11278 12521 3731 9841 7980 32813 6626 51102 63929 1 462803 36654 1280638 0 0 0 0 0 FFQ 9 0 0 0 0 0 2 1 0 798 0 2465 1549 2 1 1 741 1255 4204 1600 2781 1 681 246 4452 2 11431 3149 14408 8626 8137 33500 5078 45035 43304 29243 152902 429 260677 128621 1234678 0 0 0 FFQ 10 0 0 0 0 0 2 4 4 986 0 2930 1758 5 1 2 855 1317 4728 1633 2957 7 671 244 4682 19 11901 3357 16598 7797 8194 34336 5284 47167 43965 30787 155182 422 265161 126831 1220213 0 0 0 FFQ 11 0 0 0 0 0 2 4 4 981 15 2662 1512 4 4 3 934 1446 4549 1753 2833 8 734 241 4776 71 11827 3298 18849 5556 8200 34424 5415 47397 43609 31028 155414 392 267077 130230 1214748 0 0 0 FFQ 12 0 0 0 0 0 5 11 5 1011 26 2917 1694 12 2 4 895 1491 4530 1749 2995 11 759 254 4898 117 12041 3427 21534 2751 8438 34891 5196 46960 44484 30769 156819 401 266145 133935 1208823 0 0 0 FFQ 13 0 0 0 0 0 4 11 19 1059 58 2805 1661 4 6 8 1016 1480 4752 1788 2999 20 829 333 5047 201 12456 3550 23761 1199 8647 36258 5286 48639 44777 31074 158672 376 269351 134600 1197254 0 0 0 FFQ 14 0 0 0 0 0 5 32 23 1037 77 2752 1635 19 6 20 222 2039 4718 1818 3006 20 896 346 2068 3377 12406 3463 23164 1139 8451 16431 24186 34305 46504 35298 27712 100465 81970 218878 140820 404717 795975 0 FFQ 15 0 0 0 0 0 7 36 37 1059 124 2652 1588 26 15 33 272 2178 4642 1788 3025 31 942 329 2312 3559 12133 3629 23165 1152 8653 16935 24173 34154 47475 35084 28312 101362 82185 221031 140952 406250 788700 0 FFQ 16 0 0 0 0 0 9 51 39 1245 157 2942 1690 42 16 50 403 2178 4728 1969 3210 42 1039 357 2353 3890 12439 3744 23524 1267 9077 17903 24520 33828 48276 34768 29654 101361 81676 222014 141479 409557 778503 0 FFQ 17 15 0 0 0 0 8 90 49 1292 213 2773 1653 46 23 76 518 2271 4667 1956 3210 73 1213 402 2602 4071 12566 3862 23432 1339 9257 18433 24520 34401 49185 34774 30895 101451 83379 224817 142566 410464 767438 0 FFQ 18 127 0 0 0 0 4 76 81 1426 298 2730 1631 39 37 86 632 2318 4573 1994 3330 80 1385 451 2775 4587 12556 4061 23517 1460 9340 19407 25340 34036 49290 35650 32304 101050 83832 227241 142747 412008 757501 0 FFQ 19 18 0 0 0 0 9 111 111 1565 359 2864 1644 63 70 115 841 2169 660 6040 3500 75 1511 500 2871 5088 12696 4089 23435 1485 9535 20553 25657 33606 32294 54047 33971 86247 83670 184441 172921 426419 764750 0 FFQ 20 16 0 0 0 0 10 171 158 1675 433 2814 1680 75 94 157 1035 2242 705 5888 3613 111 1784 564 3054 5390 12842 4327 23337 1633 9826 21382 26009 33927 33412 54506 35547 86114 84929 187034 174714 426413 752379 0 FFQ 21 15 0 0 0 0 13 243 229 2043 617 3030 1702 138 151 179 1264 2592 934 6260 3745 194 1862 719 3449 5677 14020 4787 25080 1844 9525 25056 27085 36948 34560 57502 38401 89049 90914 195719 193549 428157 692748 0 FFQ 22 0 0 0 0 0 23 321 277 2215 761 2862 1747 154 209 220 1507 2606 929 6012 3733 249 2271 811 3587 6309 13747 5055 23399 2053 10006 24919 27153 35037 35137 57518 39893 88690 91092 197060 194925 430125 687388 0 FFQ 23 0 0 0 0 0 72 315 373 2225 806 2603 1644 211 224 255 1614 2382 842 5405 3729 308 2486 877 3542 6754 12744 5046 22064 2123 10402 24317 26913 32891 35844 55104 42343 86695 90318 198074 195125 435321 688009 0 FFQ 24 0 0 0 0 0 116 463 493 2278 1005 2488 1572 222 244 312 1918 2422 971 5060 3839 411 2701 1045 3627 7182 12373 5282 22045 2437 10584 25429 27586 32255 36742 54730 44659 87379 89236 200783 182166 419502 708443 0 FFQ 25 0 0 0 0 0 173 549 649 2613 1206 2510 1683 346 301 421 2254 2470 1035 5103 4073 450 3132 1181 3977 8143 12539 5715 22037 2692 11117 26474 28314 32215 38052 54614 46571 87399 90286 204652 182151 416979 695924 0 FFQ 26 0 0 0 0 0 336 894 1233 3971 2076 3675 2281 413 413 505 2603 2610 1287 5458 4231 513 3460 1357 4006 8565 12309 5941 21756 3033 11107 27168 28986 32163 39815 54761 48592 87337 91228 207148 183381 418195 677193 0 FFQ 27 0 0 0 0 0 368 1070 1637 4392 2380 3711 2294 516 589 615 3058 2753 1609 5477 4324 748 3776 1566 4127 9115 12126 6251 22057 3337 11412 28097 29491 32461 40625 54743 50756 86950 92701 209547 184190 420490 660641 0 FFQ 28 0 0 0 0 0 448 1295 1934 4596 2625 3824 2275 691 747 671 3219 2902 1933 5134 4455 911 4043 1869 4466 10166 11901 6823 21731 3721 11646 29050 30044 32234 41704 55038 52956 87286 93289 211646 183786 425207 643734 0 FFQ 29 0 0 0 0 0 526 1468 2437 4865 2934 3830 2023 774 895 804 3611 2887 2263 4902 4571 1109 4544 2065 4759 10802 11463 7403 21745 4437 11918 30140 30698 32699 43489 55279 54817 88063 94745 214662 183324 427614 625435 0 FFQ 30 0 0 0 0 0 540 1750 2926 5231 3335 4207 1849 984 990 995 3756 3007 2659 4572 4734 1252 4370 2416 5373 11928 10813 7895 21687 4945 12480 30970 31759 33044 45317 55928 57041 88468 96351 217905 181299 431182 606042 0 FFQ 31 0 0 0 0 0 656 1792 3185 4766 3685 4343 1576 1096 1161 1043 3724 3055 2986 4100 4413 1556 4347 2554 5445 12024 9733 8031 20017 5348 11436 30573 29818 31361 44422 53273 57708 83112 96298 206452 189979 419685 635247 0 FFQ 32 0 0 0 0 0 713 1971 3548 4678 3434 3568 1109 1175 1228 1207 3879 3178 3064 3775 4229 1714 4505 2824 5670 12372 9286 8768 19340 5859 11385 31308 30596 30910 45590 53208 59220 83024 96359 206744 184925 415847 639790 0 FFQ 33 0 0 0 0 0 798 2241 4002 4864 3844 3535 1025 1288 1434 1256 3850 3175 2960 3659 4484 2006 4711 3021 5844 12834 8999 9564 18785 6636 12099 32142 31610 30605 46666 54490 62065 84276 96861 206815 178773 414115 634668 0 FFQ 34 7 0 0 0 0 853 2408 4415 4901 4281 3439 1026 1468 1585 1446 3852 3416 2862 3777 4659 2261 5133 3254 6287 13725 9077 10138 18543 7265 12661 32595 32412 30334 48329 54953 64577 85187 97429 209683 175297 411333 625132 0 FFQ 35 0 0 0 0 0 919 2793 4790 5072 4711 3023 1055 1543 1817 1589 4008 3604 2549 3897 4739 2532 5128 3679 6543 14072 9403 11450 18122 8169 12657 34230 33288 29827 49897 55724 67362 85424 99252 212132 171877 408102 615021 0 FFQ 36 1 0 0 0 0 1015 2950 5259 5223 5124 2581 1053 1737 1803 1718 4008 3830 2196 4097 4783 2915 5490 3819 7104 14130 9807 11985 17485 9036 13729 35035 34425 29507 51593 57039 70696 86089 100361 214453 166722 406236 604966 0 FFQ 37 0 0 0 0 0 1177 3212 5815 5101 5461 2307 1056 1910 2065 1898 3951 3997 2045 4254 5087 3240 5545 4105 7217 14506 9948 12975 17066 9928 14196 36295 35428 29181 53439 58709 74678 87211 101365 217889 162227 402292 593224 0 FFQ 38 23 0 0 0 0 1213 3536 6255 5622 5814 2169 1158 1974 2145 2043 4043 4050 1714 4618 5227 3710 6015 4556 7636 14762 10244 13847 17080 10921 15300 37910 36714 29476 55839 60669 78512 87640 103394 218835 159060 396996 579280 0 FFQ 39 0 0 0 0 0 1247 2858 5841 4707 5238 1856 1215 1948 2204 1805 3658 3812 1424 4466 4363 3667 4223 4219 8476 13668 9696 13401 14760 10975 14185 36139 34713 27655 54633 59732 84404 84390 105656 200945 181897 401322 584602 0 FFQ 40 0 0 0 0 0 1372 3038 6272 4594 5553 1801 1246 1906 2131 1760 3605 3785 1305 4683 4686 3711 4337 4200 8531 13430 9445 13390 14722 11268 14871 35523 34293 26988 55406 59384 91596 83578 105053 197055 173895 394971 596616 0 FFQ 41 0 0 0 0 0 1450 3284 6738 4855 5740 1705 1347 1929 2274 1905 3716 3789 1319 4913 4575 3886 4525 4326 8924 13666 9287 13908 14610 11502 15297 35496 34693 27858 57207 60400 99604 83249 105586 192836 167364 388311 597926 0 FFQ 42 0 0 0 0 0 1593 3317 7251 4804 5630 1713 1552 2120 2444 1952 3831 3710 1320 5378 4604 4213 4617 4638 9118 13773 9351 14751 14895 11891 16254 36024 35214 28232 58919 62324 107379 82565 106774 190381 164627 381213 591628 0 FFQ 43 0 0 0 0 0 1654 3314 7539 5035 5570 1820 1650 2107 2450 2040 4002 3485 1371 5646 4601 4610 4851 4734 9717 14023 9185 15368 14759 12587 16786 36513 36108 28879 61579 63699 116752 82115 108018 187938 162897 374854 581744 0 FFQ 44 0 0 0 0 0 1861 3528 8158 5018 5459 1858 1798 2008 2533 2238 4158 3254 1434 5934 4556 4745 4952 5091 10302 14306 9010 15696 15280 13308 17565 37386 36995 29622 64758 64998 125213 81388 109874 185242 161740 369791 568943 0 FFQ 45 0 0 0 0 0 2071 3622 8677 5113 5456 1946 1894 2061 2684 2063 4011 2779 1537 5848 4569 7077 3655 4963 11421 14147 9465 16232 15015 13707 18468 37972 37425 30204 67694 67058 134642 81363 110684 182332 157042 367237 557866 0 FFQ 46 0 0 0 0 0 2144 3657 9025 5247 5409 2048 2028 2138 2715 2161 4278 2509 1625 6226 4556 7548 3598 5239 12050 14790 9148 16952 15406 13996 19178 38332 38386 30998 71050 68533 144079 81671 112048 179995 155007 363096 543134 0 FFQ 47 0 0 0 0 0 2398 3656 9622 5193 5308 2280 2148 2175 2708 2202 4404 2193 1729 6395 4379 8183 3781 5374 12839 14672 9169 17328 15572 14292 20104 38421 39286 31305 74037 70541 152799 82380 112312 177716 153719 359170 530210 0 FFQ 48 0 0 0 0 0 2578 3629 10211 5296 5332 2526 2246 2262 2783 2231 4746 1979 1926 6822 4508 8659 3697 5643 13754 15108 9036 17854 15532 14776 20858 38867 39845 32493 77742 72567 162178 83321 111893 174987 150980 351420 519715 0 FFQ 49 0 0 0 0 0 2788 3856 11061 5724 5750 2816 2524 2256 2888 2270 5243 1782 2054 7162 4454 9306 3792 5830 11173 18145 8132 18729 17725 15185 21781 39332 41604 32893 81982 75045 168646 84757 113595 155270 165043 344359 505048 0 FFQ 50 0 0 0 0 0 3078 3814 11568 5590 5004 3007 2693 2412 2997 2401 5902 1588 2185 7653 4321 10299 3868 6175 12088 18493 8214 19318 18161 15663 22587 41051 42719 34070 85775 77271 177207 85001 112603 153843 163341 337457 490583 0 FFQ 51 0 0 0 0 0 3231 3830 12321 5817 5135 3155 2818 2351 3036 2371 5881 1367 2357 8232 4230 11083 3848 6374 12722 19322 7863 19805 18470 16234 23729 41554 44188 35132 89245 79938 185671 86228 112536 152195 159834 331974 475923 0 FFQ 52 0 0 0 0 0 3498 3632 12991 5878 4974 3312 2981 2436 2896 2564 6039 1213 2528 8690 4277 11788 3867 6575 13649 20036 7514 20055 19524 16458 24545 41850 45112 35742 92588 82824 193917 86194 111693 150431 156827 327999 462903 0 FFQ 53 0 0 0 0 0 3743 3866 13865 6062 4865 3634 3051 2627 3010 2514 6402 1109 2700 8879 4124 12649 3779 6754 14395 20648 7361 20320 20003 16603 25728 42483 46933 36578 95895 86047 201477 87029 109872 148506 153369 323043 450077 0 FFQ 54 115 0 0 0 0 4138 3648 14474 6086 4843 3905 3081 2743 3020 2621 6348 1073 2857 9538 4157 13533 3821 7102 15110 21460 7056 20927 20753 17102 26257 42610 48000 37329 99257 89740 208911 86360 108541 146216 151702 318985 436581 0 FFQ 55 0 0 0 0 0 4349 3561 15052 6214 4754 4134 3280 2403 3044 3132 6593 829 3327 9892 4133 13306 4588 7391 16289 14102 14480 20770 20874 17512 27209 42735 49345 38477 100784 93416 216879 85959 101144 150757 149135 314097 426054 0 FFQ 56 244 0 0 0 0 4829 3585 15763 6378 4583 4372 3263 2373 3074 3288 6705 761 3463 10165 3944 14321 4580 7495 17288 14219 14699 20840 21771 17606 27514 42974 50854 38859 103612 96812 223380 85912 99261 149395 146837 309036 415945 0 FFQ 57 868 0 0 0 0 5206 3610 16854 6778 4637 4658 3223 2502 3080 3387 6982 797 3782 10819 4072 15027 4617 7681 18182 14452 15215 21485 22580 18149 28664 43065 52421 39713 105040 100933 229219 85665 97446 147262 144356 304503 403070 0 FFQ 58 817 0 0 0 0 5683 3554 17792 7267 4496 5301 3502 2889 3337 3641 7378 704 3989 11536 4198 16304 4774 8471 19510 14693 15895 21492 23212 18963 29068 44025 53997 40920 107864 104517 233226 85241 96345 146613 142684 298378 387724 0 FFQ 59 55 0 0 0 0 5920 3318 18163 7338 4093 5565 3655 3058 3110 2877 7594 700 3864 12397 3750 14290 3435 13044 15211 12064 14854 29779 23911 18995 29950 43345 55637 41669 109246 108536 237924 85047 95727 143963 139772 296768 381376 0 FFQ 60 0 0 0 0 0 6186 3147 18583 7359 3727 5898 3386 2900 3213 2829 7558 667 3992 12907 3681 14843 3346 13301 15381 11342 15107 29674 24466 19220 30003 42734 57194 42463 110889 111863 243328 84982 94724 142437 139213 293088 374369 0 FFQ 61 0 0 0 0 0 6624 3021 19521 7738 3611 5971 3242 2888 3198 2837 7536 597 4173 13240 3751 15194 3260 14246 16038 10657 15726 30526 24949 19463 30604 41858 57928 43190 112231 115207 248989 85075 93306 140651 137516 289149 366289 0 FFQ 62 0 0 0 0 0 7283 2957 20388 8270 3422 6410 3174 3125 3245 2826 7696 607 4410 13854 3813 15920 3159 14781 16751 10272 16228 31136 25575 20247 31574 41303 59389 43754 114052 119562 251796 85561 92345 139961 136116 283124 355914 0 FFQ 63 0 0 0 0 0 7554 2807 21214 8648 3042 6940 3178 3144 3358 2717 8008 580 4596 14544 3774 16650 3121 15726 17037 10014 16905 31596 26459 20609 32067 40697 61417 45029 113882 122954 255196 86295 91876 138557 136946 277846 345017 0 FFQ 64 0 0 0 0 0 7864 2721 22072 9156 2797 7342 3123 3265 3506 2720 8402 628 4919 15200 3678 17283 2982 16724 17797 9517 17623 32038 27575 21630 32823 40291 62571 45934 114887 126749 257272 87152 92454 138104 136889 272210 332102 0 FFQ 65 0 0 0 0 0 8515 2658 22820 9531 2441 7870 3168 3463 3560 2740 8114 1265 5212 9749 9848 17743 2994 12037 23795 8974 18343 31511 19210 21924 44124 39558 65034 46694 115432 130678 257509 88712 92747 137421 137617 267234 319755 0 FFQ 66 0 0 0 0 0 9072 2385 23590 10136 2163 8442 3092 3567 3644 2571 8377 1241 5448 9876 10240 18415 2958 12671 24131 8681 19227 32053 19264 22074 45939 38676 66579 48758 115531 135272 259143 89543 93401 136397 138256 260876 308311 0 FFQ 67 0 0 0 0 0 9305 2345 24481 10272 1771 8643 2904 3612 3732 2484 8682 1250 5511 10061 10605 19050 2788 13458 24943 8134 19818 32569 19538 22686 46408 38313 68023 50103 115864 139418 261314 91338 93886 135828 139290 255651 295922 0 FFQ 68 0 0 0 0 0 9826 2211 25246 10729 1516 9149 2779 3721 3898 2337 8840 1338 5641 10410 10996 19490 2733 13956 25268 7935 20526 33660 19344 23363 48298 37839 70140 50613 116385 143018 262495 93529 94741 133808 140946 249055 284221 0 FFQ 69 0 0 0 0 0 10277 2041 26150 11498 1295 9614 2661 3777 3975 2126 9214 1360 5931 10821 11244 20087 2833 14861 25499 7813 21155 33922 19624 23598 49587 37767 71489 52542 116285 146383 264361 95978 96335 132778 141985 242357 270777 0 FFQ 70 0 0 0 0 0 10819 2017 26910 11857 1049 10059 2683 4108 3980 2052 9621 1400 6016 10989 11941 20465 2780 7790 18653 22335 22239 35033 19418 23433 51369 37475 73379 53671 115471 150829 266206 98886 97405 131777 144187 233757 257941 0 FFQ 71 0 0 0 0 0 11283 1874 27652 12085 809 10562 2491 4088 4095 1973 9876 1387 6212 11382 12177 21055 2767 8219 18346 22872 22834 35501 19729 23735 52568 37529 75610 55453 115430 153726 268311 102533 98699 129261 146290 226178 245408 0 FFQ 72 0 0 0 0 0 11847 1713 28786 12508 704 11152 2463 4228 4114 1771 10208 1468 6503 11663 12465 21456 2828 8679 18222 23323 23623 36126 19701 23251 54327 37578 77759 57006 115081 158941 269613 106340 100374 127005 148033 218259 230882 0 FFQ 73 0 0 0 0 0 12164 1592 29580 12857 533 11553 2409 4368 4180 1669 10635 1513 6826 12017 12816 21865 2778 9145 18089 23493 24307 37176 19736 23090 55792 38155 79252 58655 114606 161984 272967 109908 102617 125511 150477 208404 217281 0 FFQ 74 0 0 0 0 0 12746 1529 30640 12951 426 11982 2223 4421 4191 1445 10976 1500 6941 12437 13321 22126 2794 9583 17985 24395 24964 37938 19764 22764 56947 38680 80516 60465 114754 165227 275269 114355 104569 121045 153642 199525 204964 0 FFQ 75 0 0 0 0 0 13134 1487 31634 13288 339 12564 2150 4495 4471 1392 11135 1553 7087 12894 13506 22464 2781 9833 17368 24733 25408 22545 35326 22298 58252 39330 82204 61526 114304 168732 280819 119237 107390 116488 156035 189593 192205 0 FFQ 76 0 0 0 0 0 12593 1245 30722 14763 279 17339 2969 4262 6579 1563 14354 1336 9392 11988 17034 31513 3808 14083 24867 34392 33281 31972 48490 41940 80308 61395 124362 92053 123659 223051 185992 128879 107055 124145 190885 106188 41264 0 FFQ 77 0 0 0 0 0 13497 1212 31519 13706 163 15072 2335 4355 4988 1171 12954 1321 8225 11889 15140 26566 3228 11631 19434 29438 28452 26928 42692 28010 71768 51427 105365 83333 131090 217589 215048 136762 99558 122006 220680 141819 49629 0 FFQ 78 0 0 0 0 0 13698 1064 32280 13110 125 14041 2002 4251 4448 947 12362 1499 7665 12292 14120 24392 2847 10449 17140 26924 27316 24540 37968 22368 65877 44717 91326 72420 124961 198586 267803 138249 110373 111099 191959 162066 92716 0 FFQ 79 0 0 0 0 0 13838 953 32870 12749 84 14039 1924 4541 4049 872 12185 1503 7528 12582 14031 23311 2771 10233 15922 26424 26439 23342 36665 19532 63620 42790 85691 68312 119574 189164 302426 141961 119284 99279 177418 149013 123081 0 FFQ 80 0 0 0 0 0 14214 943 33723 12582 58 13933 1773 4697 3996 742 12097 1564 7516 12884 14105 23478 2637 9709 15571 25846 26953 22635 36170 17952 63449 41690 82631 67002 118544 187227 320587 147760 127214 89667 175164 134977 128310 0 FFQ 81 0 0 0 0 0 14728 854 34569 12529 33 14386 1680 4737 3959 693 12350 1512 7708 13549 14407 23844 2737 9857 15119 25853 27753 23140 36378 16783 64170 42157 82062 68200 117688 188871 332871 153464 132888 83009 173654 120730 121078 0 FFQ 82 13 0 0 0 0 15110 854 35665 12709 20 14899 1810 4774 3778 662 12591 1615 7869 13956 14609 23940 2872 9603 15059 26329 28480 23527 37361 16140 65713 43255 81919 68285 118966 192130 341752 158302 139325 76045 173921 108041 108101 0 FFQ 83 0 0 0 0 0 15715 827 37023 13016 13 15470 1658 4983 3905 582 12875 1638 8023 14489 15174 24362 2899 9672 15281 26705 29229 23988 37651 15300 67022 43934 82444 70144 120149 195979 349559 164534 144664 69556 172531 94838 94168 0 FFQ 84 0 0 0 0 0 16248 820 38293 12957 21 16019 1757 5050 3820 574 13098 1687 8131 15171 15097 24724 3005 9817 15362 27480 30121 24379 37751 14424 69326 44738 82921 71860 121920 201891 356588 169932 149682 63928 169757 81731 79920 0 FFQ 85 0 0 0 0 0 16748 794 38986 12803 24 16584 1743 5180 3820 514 13505 1697 8424 15414 15354 25496 3016 9222 15505 28004 31011 25141 38405 13700 70674 46105 83991 72965 123430 208049 364398 175146 154467 57135 166462 69118 66970 0 FFQ 86 0 0 0 0 0 17178 777 40697 13036 22 16939 1804 5434 3733 448 13988 1776 8557 15897 15681 26088 3153 8990 15495 28573 31992 25775 39325 12692 73191 46557 85250 74358 123942 214148 371948 180118 158864 51107 160257 57320 54890 0 FFQ 87 0 0 0 0 0 17277 710 41281 12883 25 17856 1807 5322 3645 401 14133 1739 8668 16386 15911 26798 3355 8750 15884 29006 32488 25709 39748 12118 74292 47435 86883 76462 126097 221091 379876 184776 163181 45388 151911 46796 43912 0 FFQ 88 0 0 0 0 0 18123 645 42623 12767 25 18257 1816 5490 3377 401 14323 1734 8990 16669 16110 26977 3317 8506 16115 29501 33374 26586 40750 10918 76789 48156 87985 77978 128633 226874 389478 188453 165256 39474 141127 37860 34543 0 FFQ 89 0 0 0 0 0 18805 648 44403 13169 17 18275 1900 5699 3548 408 14898 1922 9144 17639 16576 27912 3368 8111 16263 30135 34571 27481 41468 10450 78705 48546 89975 78578 129208 233875 397166 191441 166572 34394 128566 29485 26679 0 FFQ 90 0 0 0 0 0 19125 635 45368 12995 22 19226 1921 5699 3359 378 15353 1947 9442 17760 17010 28508 3546 7719 16699 30471 35585 27914 42158 9692 81177 49183 91885 80297 129701 241698 405445 195073 166337 29309 114527 22883 19953 0 FFQ 91 0 0 0 0 0 19667 591 46651 12969 15 19496 1874 5899 3222 359 15410 1893 9736 18223 17444 29140 3725 7326 17294 31067 36599 28155 42668 8764 82985 49607 93277 82036 131319 249529 415511 196256 164171 24296 101242 17129 14455 0 FFQ 92 0 0 0 0 0 20297 623 48111 12701 24 19996 1954 6138 3066 357 15984 2029 9776 18995 17619 29821 3644 6876 17780 31437 37951 28438 43402 8033 84974 49138 95108 83437 132666 257288 423297 199462 159835 20203 86875 12358 10307 0 FFQ 93 0 0 0 0 0 20607 612 49988 12718 18 20644 2012 6165 2938 318 16317 2125 10167 19187 18313 30477 3868 6410 17857 31997 39172 29140 44297 7196 87120 49843 97305 84988 132969 265508 431246 200706 152633 16486 72850 8775 7028 0 FFQ 94 0 0 0 0 0 21226 638 51745 12713 29 21315 2066 6511 2700 301 16709 2181 10337 19937 18760 31306 3920 6027 18234 32726 40651 29398 44635 6778 88911 49439 99086 87139 133666 273217 438813 200763 143743 13115 60339 6181 4745 0 FFQ 95 0 0 0 0 0 22018 583 52575 12840 34 22045 2227 1084 8201 266 17263 2132 10803 20078 19614 31921 3839 5436 18381 33120 41954 29190 45960 6420 91010 48920 100351 89633 133922 280845 446124 201447 133172 10197 48976 4244 3175 0 FFQ 96 0 0 0 0 0 22611 595 54876 12715 22 22513 2129 1077 8243 309 17352 2100 11014 20472 19773 32535 3898 5126 18960 33788 43469 29519 46395 5812 93571 48753 102540 90581 133168 290495 452195 200776 121040 7969 38798 2787 2024 0 FFQ 97 3 0 0 0 0 23706 553 56989 12741 29 23197 2163 1139 8190 285 17655 2213 11251 21052 20630 33504 3935 4595 19268 33981 44931 29052 47099 5523 96019 49046 105021 93323 133237 298046 456470 198498 107801 5959 29901 1757 1238 0 FFQ 98 33 0 0 0 0 24592 527 59032 13005 33 24077 2356 1236 8240 303 18533 2352 11739 21995 21236 34659 3991 4374 20058 34702 46801 28775 47601 5207 98000 49268 105865 95443 131529 305470 460783 194243 95270 4476 22363 1072 761 0 FFQ 99 56 0 0 0 0 24982 533 61149 13141 32 25206 2483 1369 8133 302 19124 2370 11925 22208 22063 36192 3845 3752 20323 35670 48535 28967 48694 4886 99763 48573 107489 97731 130675 311225 464347 190427 83057 3223 16455 643 452 0 FFQ 100 6861 0 0 0 0 45042 2031 132196 23796 80 40919 6253 3246 14844 783 27822 4664 18575 45760 34432 56329 9688 6815 27267 41585 77665 63590 52146 7884 145595 54832 136258 112410 99163 278538 273994 101347 39045 1074 7148 210 113 0 # Last Fragment Qualities. Use `grep ^LFQ | cut -f 2-` to extract this part. # Columns correspond to qualities and rows to cycles. First column is the cycle number. LFQ 1 3422 0 0 0 0 0 0 8447 0 0 14555 0 3588 0 0 3527 17847 0 1816 140 2366 0 7197 13150 2390 17976 43747 45810 56861 4645 158058 725631 0 135048 733779 0 0 0 0 0 0 0 0 LFQ 2 5210 0 0 0 0 0 0 8640 0 0 12383 0 3054 0 0 2235 19864 0 1893 54 2417 0 8223 12158 2266 18259 40368 53608 53750 4583 138585 672747 0 79528 860175 0 0 0 0 0 0 0 0 LFQ 3 4861 0 0 0 0 0 0 8901 0 0 13580 0 2965 0 0 2401 19844 0 1768 38 2630 0 9162 11773 2246 17980 39531 55922 53696 4400 135439 649009 0 67922 895932 0 0 0 0 0 0 0 0 LFQ 4 4925 0 0 0 0 0 0 8900 0 0 12597 0 2953 0 0 0 8337 6646 1773 6612 2642 0 6747 2564 2239 11411 17687 10863 27065 1452 42379 6698 72856 75730 0 508791 0 1158133 0 0 0 0 0 LFQ 5 5204 0 0 0 0 0 0 8979 0 0 12079 0 2939 0 0 0 8376 6363 1865 6369 2628 0 6767 2625 2295 11442 17898 10669 26996 1419 42358 6457 73534 75739 0 514375 0 1152624 0 0 0 0 0 LFQ 6 4852 0 0 0 0 0 26 4002 7230 0 6277 2950 1050 1981 295 2680 2387 10222 2960 4459 917 1562 3296 7562 1653 12241 14295 10562 17693 11267 39597 15667 77407 64213 1 477904 38316 1154476 0 0 0 0 0 LFQ 7 4539 0 0 0 0 14 17 4310 8032 0 7559 3864 1077 1919 299 2725 2477 10631 3266 4643 816 1518 3489 7833 1698 12853 14924 11166 16349 11770 40293 15427 77575 64229 3 474921 38631 1151133 0 0 0 0 0 LFQ 8 4361 0 0 0 0 22 18 4296 7655 0 6652 3372 1105 1960 305 2825 2511 10149 3267 4580 946 1607 3461 8010 1696 12753 14376 12850 15498 11633 39686 15666 77566 63538 3 475161 38989 1153483 0 0 0 0 0 LFQ 9 3841 0 0 0 0 29 31 4694 8214 0 6991 3538 1116 1968 331 2972 2568 10146 3388 4645 907 1627 3412 8131 1715 12840 5192 23394 14189 11717 40023 13486 57243 47053 38387 159563 634 264538 119786 1121691 0 0 0 LFQ 10 4029 0 0 0 0 41 53 4904 8593 1 7554 3784 1122 1991 356 3018 2671 10000 3481 4742 974 1773 3446 8245 1645 13458 5369 25951 12165 11820 41260 13146 58788 47755 37953 160265 602 265268 121932 1111845 0 0 0 LFQ 11 4001 0 0 0 0 51 70 5003 8631 32 6962 3468 1171 2145 379 3087 2720 10100 3344 4659 898 1776 3310 8324 1785 13383 5455 28386 10169 11499 42067 12608 59744 47624 37905 161226 583 268251 123673 1105511 0 0 0 LFQ 12 3546 0 0 0 0 68 102 5201 8797 90 7335 3450 1235 2072 368 3319 2895 10389 3596 4990 891 1933 3504 8509 1822 14113 5440 31136 7808 11889 42930 12379 60189 48449 38660 163215 546 270081 123708 1095345 0 0 0 LFQ 13 3816 0 0 0 0 86 121 5251 9026 166 6965 3372 1246 2177 359 3500 2833 9917 3546 4897 904 1986 3558 8522 2003 13756 5449 32485 6527 11883 43654 12090 60781 48588 38611 164257 542 272075 125134 1089917 0 0 0 LFQ 14 3442 0 0 0 0 110 308 5552 9304 301 7433 3521 1237 2164 404 1069 4534 11116 3580 5172 910 2029 3566 5306 5546 14404 5629 32145 6474 12085 24911 30192 46476 51178 41821 28248 106067 83000 217355 146223 398145 679043 0 LFQ 15 3797 0 0 0 0 133 452 5488 9978 436 7595 3651 1315 2274 406 1215 4590 11007 3675 5115 931 2238 3499 5292 5995 14546 5779 32355 6576 12205 25427 30086 47068 51290 42436 28734 106154 83985 218581 146979 398190 670527 0 LFQ 16 3725 0 0 0 0 156 574 5754 10849 608 8266 4175 1391 2297 544 1429 4832 11183 3943 5714 956 2334 3640 5488 6427 14969 5860 32431 6644 12503 26156 30306 46779 52037 42295 29800 106486 83831 220974 147819 397056 659769 0 LFQ 17 3974 0 0 0 0 196 723 5839 11194 768 8043 3824 1385 2445 560 1678 5031 10960 3768 5636 1027 2480 3599 5796 6608 15445 5959 32664 6850 12462 27064 29991 46700 52140 42850 30779 106890 85631 222717 149790 397133 649401 0 LFQ 18 4396 0 0 0 0 217 854 5825 11137 960 7136 3512 1361 2547 591 2048 5155 10678 3793 5484 1068 2713 3528 5885 7059 15653 5978 32523 7145 12712 28076 30564 46376 53556 42864 32475 106299 86885 226119 150600 397758 638470 0 LFQ 19 4835 0 0 0 0 247 1052 6144 12040 1291 7526 3897 1510 2683 673 2457 5055 2815 12138 5809 1076 2927 3754 5931 7664 15714 6767 32144 7563 12890 28917 30515 46533 36499 61729 35050 88372 89917 182643 182508 411185 639530 0 LFQ 20 4622 0 0 0 0 263 1270 6376 12422 1541 7288 3730 1535 2731 649 2811 5311 2993 11795 5950 1159 3231 3763 6212 7907 16369 7073 31233 7547 13172 30326 30626 45858 37684 61361 36258 87834 91779 185585 186480 412067 625189 0 LFQ 21 4238 0 0 0 0 287 1394 6671 12490 1878 6483 3644 1673 2946 765 3212 5390 3207 11031 5830 1226 3498 3823 6229 8373 16277 7163 30651 8040 13295 31787 30532 44613 38335 60900 38960 87498 91785 187551 189206 412205 616914 0 LFQ 22 4275 0 0 0 0 359 1709 7093 14258 2533 7587 4330 1837 3031 880 3704 5875 3359 10981 6401 1380 3775 3945 6372 9414 17084 7473 30116 8066 13603 32445 31224 43618 39431 59833 41040 87925 90997 190290 189969 409488 604300 0 LFQ 23 3730 0 0 0 0 538 1812 7314 13755 2628 6092 3549 1931 3155 877 4325 5859 3765 10159 5933 1587 4146 4221 6519 9872 16850 7736 29733 8448 13406 34197 31556 43333 40270 60069 43107 87232 92487 192166 194056 409569 594018 0 LFQ 24 3967 0 0 0 0 605 2117 7437 14188 3135 5915 3519 2032 3302 996 4784 6050 3279 9827 6184 1745 4492 4492 6767 10368 17096 8148 28894 8783 13841 35683 31870 42690 41753 60410 45943 87686 93810 197558 185266 392900 602468 0 LFQ 25 4087 0 0 0 0 666 2532 7963 14989 3621 6022 3510 2205 3392 1103 5292 5960 3335 9319 6498 1871 5029 4782 6965 11203 17052 8624 28647 9340 14693 36747 32485 42879 43267 59795 48429 87304 95759 201186 188146 391590 583713 0 LFQ 26 4633 0 0 0 0 872 2960 7817 14754 4345 6193 3693 2302 3724 1191 5782 5964 3473 9091 6739 2148 5608 5141 7272 11985 16860 9220 28668 10106 14699 38066 33483 42571 45035 60153 50842 87575 96665 203130 191675 390829 564736 0 LFQ 27 4549 0 0 0 0 954 3250 8180 15159 4703 5859 3351 2508 3705 1417 6303 6185 3539 8708 6657 2415 5914 5512 7314 12700 16681 9790 28223 10684 15172 38636 33532 43311 46234 59911 53300 87685 98097 205505 192587 392721 549049 0 LFQ 28 4275 0 0 0 0 1139 3753 8709 15440 5488 6297 3459 2732 3789 1578 6903 6335 3906 8488 6716 2690 6354 5718 7673 13644 16555 10664 28205 11463 15583 39744 34298 43505 48315 59791 54885 87646 98360 208509 192014 394968 530409 0 LFQ 29 4121 0 0 0 0 1248 4232 9382 15335 5790 5802 3005 2871 4030 1861 7081 6416 4266 8069 6742 2972 6850 6025 8134 14564 16043 11178 27989 11902 16119 40951 35208 43526 50434 60314 57519 87963 100263 210719 190562 398661 511853 0 LFQ 30 3875 0 0 0 0 1425 4843 9921 15530 6317 5819 2667 3136 4318 2000 7313 6580 4534 7547 7032 3332 6701 6382 8801 15828 15423 12012 27514 13013 16497 41579 35690 43489 52138 60622 59832 89357 100824 213579 190193 401566 492771 0 LFQ 31 3127 0 0 0 0 1590 5621 10801 16292 7229 6520 2599 3443 4623 2304 8466 6410 4689 7340 7327 3568 7125 6863 9386 17272 15020 13140 27806 13725 17234 43262 37250 43431 54013 61437 61473 89658 100727 217629 188021 401402 472177 0 LFQ 32 3707 0 0 0 0 1752 6036 11095 15847 7422 5798 2130 3672 4837 2494 8062 6252 4915 7248 7273 4137 7712 7416 9724 17603 15191 13971 27241 14729 17699 44390 37658 43346 56032 61741 63485 90616 102753 220642 186785 403089 455500 0 LFQ 33 3758 0 0 0 0 1945 6328 11125 15023 7208 5427 1941 3780 4887 2621 7375 5968 4593 6710 6732 4466 7391 7359 9553 16640 14106 14244 24446 15792 16495 43057 36167 40532 54574 58235 63702 84272 103561 209098 198736 398478 483675 0 LFQ 34 3039 0 0 0 0 2129 6743 11671 14808 7681 4821 1899 4091 5190 2693 8092 6285 4254 6966 6818 4843 7828 7732 9677 17176 14273 15136 23456 16681 16748 43144 36600 40545 55507 58265 65138 84621 100539 207648 187570 394851 494842 0 LFQ 35 3515 0 0 0 0 2365 7509 12829 15612 8880 4575 2104 4386 5476 3107 7884 6629 3927 7268 6976 5425 7748 7919 10130 17957 14465 16230 22909 17350 17408 44365 37237 39679 56492 58565 66919 84614 101311 208337 177625 387696 496577 0 LFQ 36 3811 0 0 0 0 2595 7724 12933 15010 8223 3483 2270 4533 5894 3208 7446 6864 3415 7519 6636 5899 8124 8565 10512 18138 15160 17450 22185 18442 18214 45831 38450 39040 58224 59782 69343 84877 101301 211952 171407 383648 491892 0 LFQ 37 4415 0 0 0 0 2714 8154 13800 15178 8846 3133 2519 4654 6076 3429 7294 6772 3002 7962 6855 6361 8745 8871 10749 18232 14942 18322 21661 19767 19242 46756 39197 38814 60528 60869 73225 86333 102063 213776 164073 380106 482565 0 LFQ 38 4307 0 0 0 0 3012 8743 14439 15501 9203 2808 2796 4671 6398 3691 7403 6883 2761 8438 7056 6774 9192 9345 11290 18334 15153 19507 21122 21050 20016 47472 40023 38789 62007 62298 76340 86214 103390 215323 160546 374688 473017 0 LFQ 39 4903 0 0 0 0 3287 9064 15311 15643 9325 2679 3067 4939 6554 3934 7449 6856 2557 8857 7075 7050 7956 9318 13401 18571 15114 20509 20986 21956 20597 47660 40927 38954 63537 63493 80252 85874 103143 206567 168909 371661 462065 0 LFQ 40 3856 0 0 0 0 3569 9814 16470 15920 9543 2597 3496 5213 6793 4001 7893 7077 2536 9472 7109 7946 8158 9929 13947 19213 15433 22044 20784 23155 21415 49349 41528 39438 66023 64907 84175 85545 103200 205416 164726 365531 452779 0 LFQ 41 3996 0 0 0 0 3967 10517 17069 16385 10012 2630 3890 5321 7298 4288 7910 6839 2836 10308 7302 8412 8555 10468 14672 20005 15408 23150 20838 24147 22789 49941 42525 40254 68366 66646 88901 84813 103143 204147 162776 359223 440253 0 LFQ 42 2730 0 0 0 0 4015 9023 16366 14809 8535 2846 4063 6143 7030 3755 7441 6045 2581 9934 6326 8572 8246 10153 13928 19008 14050 22873 19180 24689 21784 47668 40706 39488 68727 66705 95725 80597 107489 197314 180747 368496 432213 0 LFQ 43 2780 0 0 0 0 4260 8993 17309 14791 8155 2726 4151 6120 7241 3662 7180 5479 2700 10308 6102 8812 8399 10183 14416 18568 13506 22977 19208 24540 22651 47514 40349 39392 70561 66593 102601 79433 104696 193043 173684 364412 442505 0 LFQ 44 3093 0 0 0 0 4634 9114 18154 14941 8136 2938 4224 5405 6932 3913 7281 5235 2732 10863 6115 8725 8549 10613 14798 18752 12963 23467 19492 24582 23418 46912 40538 39413 72112 67114 110174 78624 104545 189259 169150 361209 441881 0 LFQ 45 3101 0 0 0 0 4959 9206 19158 14724 7939 3290 4640 4982 7120 3796 7339 4278 2976 10470 6107 13327 6586 10200 16065 19079 13994 24548 19375 25239 24588 48306 40966 40149 74664 68699 116698 78097 103938 184929 158467 357405 440596 0 LFQ 46 2542 0 0 0 0 5291 9297 20366 14841 7756 3608 4999 5175 7272 3779 7625 3918 3037 10949 6094 13881 6725 10364 16966 19215 14059 25349 19615 25816 25640 49125 42108 40764 77721 70386 123258 77262 104530 182905 155485 351059 431218 0 LFQ 47 2414 0 0 0 0 5746 9329 21627 14856 7768 3901 5467 5237 7353 4060 7958 3622 3347 11282 5799 14718 6906 10756 17872 19920 14108 25606 20015 26136 26956 50287 43325 41220 81173 71976 128091 77693 104179 180681 153318 344692 420606 0 LFQ 48 2659 0 0 0 0 6276 9529 22161 14929 7722 4415 5740 4771 7386 4053 8519 3227 3463 12109 5766 15554 6668 10954 19186 20631 13860 26719 20156 26172 28027 50279 44086 41851 84666 73608 134001 77987 103580 179658 150799 339709 409124 0 LFQ 49 2477 0 0 0 0 6809 9598 23419 15360 7705 4637 6076 4875 7291 4103 8913 2820 3681 12840 5834 16282 6965 11153 16234 23571 12847 27628 22358 26546 29711 50992 45330 42506 88173 75327 136009 79964 104681 159859 165622 333230 398574 0 LFQ 50 2439 0 0 0 0 7249 9589 24506 15221 7288 5088 6338 5127 7348 4179 9266 2522 4073 13242 5479 17392 6939 11601 17361 24357 12526 28135 22887 27027 30477 51914 46610 42955 91232 77586 140893 80104 104026 157835 162227 328273 388689 0 LFQ 51 3009 0 0 0 0 7443 8719 24626 15428 6915 7029 8773 5832 9996 4196 12881 2243 4415 14904 4367 23417 8003 16010 21693 31967 18697 38359 24448 40443 35474 86150 62395 53438 134511 89717 136368 80069 179635 221327 240657 232322 84124 0 LFQ 52 2480 0 0 0 0 8155 8745 25699 15195 6396 6778 7689 5497 8243 3938 11056 1919 4512 14241 4482 21348 7028 13756 19998 27438 13909 32788 24026 32697 33816 64867 57456 52800 116876 91707 135129 77929 135827 207434 276844 314900 106402 0 LFQ 53 3354 0 0 0 0 8662 8545 27055 15095 6158 6509 7010 5019 7333 3991 10451 1710 4871 14254 4515 20859 6538 12587 19955 25698 12040 29918 23988 28955 32754 55085 51926 47643 105690 89268 148233 78926 108284 174904 216676 350703 224838 0 LFQ 54 3573 0 0 0 0 9322 8225 27762 14625 5585 6767 6808 4837 6890 3880 10203 1684 4838 14575 4438 21398 6276 12286 20456 25497 11350 28695 24275 27223 32611 51236 50165 45357 101305 87914 160939 78547 100385 154295 176920 325965 322893 0 LFQ 55 3889 0 0 0 0 9900 7701 28520 14566 5229 7240 6876 4596 6529 4553 10316 1497 5202 14660 4436 20720 7282 11762 20975 18376 18467 28185 24159 27237 32740 49367 50212 44762 100886 89150 169245 77659 92702 149033 159816 310782 360773 0 LFQ 56 4861 0 0 0 0 10554 7631 29976 14675 5102 7576 6959 4285 6664 4722 10278 1397 5595 15341 4500 21673 7468 12115 21831 18232 18965 27916 24345 26707 33171 48406 50824 45251 101088 91418 174333 76960 90534 143168 151586 301621 372272 0 LFQ 57 4806 0 0 0 0 11248 7306 30995 14983 4758 8235 6991 4429 6249 4751 10620 1410 5955 15668 4265 22600 7465 12160 22706 18173 19388 27829 24821 26888 33881 47865 52077 45591 101826 95024 178609 76660 88826 139841 146942 296112 372047 0 LFQ 58 5055 0 0 0 0 12034 7049 32000 15082 4621 8827 7114 4420 6294 4851 10808 1278 6173 16284 4094 23456 7500 12560 23996 17808 20213 27709 25598 27170 34708 46956 52886 45952 104158 97573 182496 76391 87624 137864 144710 290563 366125 0 LFQ 59 5687 0 0 0 0 12847 6835 33414 15319 4335 9410 6740 4587 6144 3873 11230 1316 6450 17895 3917 21348 5825 17454 19903 15178 18498 37832 26370 26969 35257 46573 54887 46675 104369 101028 185001 76493 86287 135908 138772 287101 362273 0 LFQ 60 5750 0 0 0 0 13606 6579 34693 15690 4001 9977 6838 4675 6175 3863 11607 1231 6625 18693 3932 22114 5723 18098 20875 14756 19135 38082 27248 27387 35470 45888 56876 47193 105003 104848 186794 76119 86268 134338 138234 282146 353470 0 LFQ 61 3624 0 0 0 0 14369 6326 36128 15855 3654 10856 7338 5489 6096 3764 12005 1170 6991 19177 3821 22529 5558 18745 21495 14225 19175 38663 27588 27005 36250 45501 57894 48203 106190 107965 189523 75964 85314 133315 138503 278860 344872 0 LFQ 62 3378 0 0 0 0 15183 6102 37177 16606 3360 11472 7407 5513 6083 3881 12437 1206 7252 19748 3682 23551 5510 19793 21938 13500 20285 38740 28474 27468 37193 44605 58780 48474 106416 111375 190963 76518 85498 131822 137621 274372 336617 0 LFQ 63 3226 0 0 0 0 15908 5658 38698 16881 3002 12199 7216 5172 5964 3759 12737 1179 7804 20747 3672 24179 5442 20629 22584 13214 20694 39648 29047 27825 37638 43723 59785 49676 107124 114790 192850 77371 85297 130317 137828 269268 327249 0 LFQ 64 2956 0 0 0 0 16957 5351 40155 17596 2814 12885 7241 5223 6092 3758 13237 1139 7944 21201 3746 25282 5223 21607 23497 12688 21798 39978 29927 28425 38735 42837 61578 50304 106816 117745 193996 78541 85467 129388 138631 263775 315467 0 LFQ 65 2702 0 0 0 0 17917 5070 41161 18041 2261 13548 6921 5413 6091 3541 12947 1970 8256 14677 11103 26166 5261 15259 31442 12323 22591 39543 21378 28255 49945 42976 62908 51564 106744 120962 193068 79917 86203 128313 139740 258349 305474 0 LFQ 66 2981 0 0 0 0 18926 4749 42243 18405 1989 14341 6311 5405 6177 3500 13305 1978 8640 14783 11641 26907 5139 15244 32524 11767 23496 39660 21612 28839 51968 42146 64964 52465 106699 124998 193909 81225 87116 127913 140620 252099 293316 0 LFQ 67 3296 0 0 0 0 19529 4501 43953 19177 1750 15295 5956 5629 6211 3307 13824 2021 9176 15193 12323 27397 4918 16141 33442 11403 24258 40867 21515 29046 53152 41648 66500 53650 106252 128081 194438 83802 88134 127197 141833 245057 280128 0 LFQ 68 3938 0 0 0 0 20600 4239 45000 19750 1368 16317 5717 5770 6505 3157 14499 2007 9386 15093 12569 28618 4886 16676 33927 11160 25419 41170 21698 28936 54321 41392 68266 55214 105208 131290 194194 85642 89251 125645 144112 238538 268522 0 LFQ 69 3661 0 0 0 0 21289 3854 46283 20161 1076 16803 5536 5711 6260 3035 14675 2041 9466 15352 13183 28562 4747 17273 34240 10892 26099 41254 21937 28406 55874 40856 69446 56676 104736 136193 195371 87995 90115 124295 146369 232417 257861 0 LFQ 70 3469 0 0 0 0 22399 3611 47304 20530 882 17510 5390 5847 6272 2757 15187 2152 9816 15860 13706 29267 4722 9477 24912 28385 26748 42061 22006 28171 57143 40843 71582 57340 104137 139213 197241 91238 91219 122724 147746 225874 245259 0 LFQ 71 3383 0 0 0 0 23882 3444 49156 21050 699 18158 5198 6053 6324 2573 15858 2143 10270 16482 13942 29734 4768 9921 25077 28823 27813 42699 22083 28536 58489 41094 72739 58715 103733 141770 197727 94619 92485 120514 149254 217564 233228 0 LFQ 72 3359 0 0 0 0 24332 3104 50171 21913 559 19325 4997 6433 6361 2397 16599 2173 10533 17072 14593 30093 4848 10391 25143 29049 28907 42832 22190 28013 59800 40787 74731 60636 102505 144814 199747 98704 94040 117841 151914 208156 220938 0 LFQ 73 3581 0 0 0 0 25311 2920 51803 21937 385 20208 4668 6188 6352 2363 16817 2189 10861 17090 15072 31265 5003 10739 25104 29981 29600 43905 22119 28118 61224 41313 76557 61722 101462 147325 202152 102966 96018 115381 153042 199418 207841 0 LFQ 74 4834 0 0 0 0 26391 2694 53715 22657 334 21026 4310 6485 6483 2184 17625 2243 11326 17725 15830 31757 4828 11330 25280 30450 30604 44841 22090 27569 63199 42356 77980 62961 100525 150558 202542 107127 98081 111827 155559 189364 193310 0 LFQ 75 6319 0 0 0 0 27331 2688 55368 22879 245 22082 4216 6522 6477 1981 18107 2301 11751 18249 16274 32324 4946 11476 25043 30979 31620 29899 38610 27358 65049 42792 79932 64613 98969 154296 205299 111493 100000 108473 156879 179290 177870 0 LFQ 76 6014 0 0 0 0 28213 2464 57199 23389 190 23088 4270 6771 6514 1791 18803 2391 11997 18720 16947 33062 4908 11870 24786 31696 32380 29905 38354 26787 66306 43455 81283 66841 99439 157839 207877 115826 102706 105291 158832 168283 163513 0 LFQ 77 6444 0 0 0 0 29168 2286 58678 23925 139 23889 3810 7115 6508 1680 19726 2454 12519 18912 17229 33376 4999 12020 24601 32115 33462 31005 39132 25953 68099 44659 82016 67707 98397 160217 211009 121855 104973 100269 160908 157588 151158 0 LFQ 78 7027 0 0 0 0 29934 2045 60105 23612 108 24649 3698 6967 6426 1501 20054 2403 12673 19547 17756 33626 5099 11942 24711 32694 33962 31195 39517 25135 70008 45181 82180 69167 98799 164944 214790 127632 108477 94675 162111 146638 139012 0 LFQ 79 5849 0 0 0 0 30665 1910 61689 23942 83 25761 3882 7228 6374 1370 20263 2390 12918 20342 17837 34495 4878 12312 24216 32814 35450 31575 40418 24258 70864 46233 83440 70474 99943 167828 220309 132808 111385 89576 163236 135035 125950 0 LFQ 80 4393 0 0 0 0 31981 1781 63628 23986 72 26944 4478 7574 6272 1330 20873 2412 13190 20374 18274 34752 4952 12115 24344 33756 36141 31693 41085 23418 73185 47370 83476 72033 100062 172370 224445 137936 114585 84201 164195 123204 113120 0 LFQ 81 3646 0 0 0 0 32794 1686 66221 24228 55 28126 4395 7467 6191 1258 21211 2629 13520 21200 18627 35154 5135 12252 24617 34167 37196 32455 41262 22642 75112 48364 84274 73715 100473 177260 229209 142249 117922 78698 163571 111036 99983 0 LFQ 82 2586 0 0 0 0 33498 1602 67056 24361 43 29647 3997 7477 6027 1080 21832 2559 14064 21625 19132 36767 5235 12186 24579 34969 38030 32826 41924 21880 75797 49781 84742 75146 100912 181346 235480 148387 122046 72195 162873 98454 87859 0 LFQ 83 3491 0 0 0 0 35184 1581 69905 24462 42 29370 3527 7864 6044 998 22254 2605 14379 22104 19504 36839 5334 12036 25043 35500 38795 33770 42714 20873 78013 50605 85405 76627 101230 185581 241198 152977 125522 65818 161053 85695 76058 0 LFQ 84 3499 0 0 0 0 35930 1438 71283 24544 56 30435 3444 7779 6061 1024 22960 2535 14800 22726 19836 37259 5479 11769 24903 35951 39744 34632 42968 20170 79772 51161 86750 77847 102436 190395 247737 157302 129868 59109 157836 73959 64603 0 LFQ 85 3505 0 0 0 0 36777 1344 73065 24944 57 31028 3492 7951 5900 960 23761 2585 15288 23312 20440 37876 5689 11655 25444 36497 41101 35246 43816 19089 81325 51961 87202 79381 103596 195927 253699 161476 133360 53089 152742 61878 53542 0 LFQ 86 3108 0 0 0 0 38069 1374 74924 24999 63 31943 3271 8382 5890 882 23947 2643 15111 23888 20820 39163 5656 11201 25307 36873 42093 35697 44601 18380 83516 52952 88500 80264 104137 202086 259796 164798 136918 46672 147356 50926 43794 0 LFQ 87 2837 0 0 0 0 38921 1310 76660 24926 53 32799 3448 8468 5614 863 24530 2762 15630 24187 21039 39442 5794 10881 25762 37625 43322 36409 44648 17344 85916 53451 89873 81517 104960 208603 267154 167811 139572 40466 138521 41948 34934 0 LFQ 88 2773 0 0 0 0 40165 1291 79776 25340 56 33854 3446 8408 5381 874 24881 2856 15854 25101 21696 40400 5994 10518 26263 37875 44375 37230 45283 16605 88072 54033 91286 82687 105891 214467 273823 169566 140457 35276 127715 32978 27454 0 LFQ 89 3454 0 0 0 0 42124 1125 82346 25562 59 34367 3489 8966 5174 847 25821 2823 16285 25873 22367 41339 6058 10182 26259 38548 45721 38049 45527 15548 89512 54375 92925 84042 106460 220787 279746 170572 140651 30020 115690 26092 21215 0 LFQ 90 3728 0 0 0 0 42807 1102 84436 25885 55 36156 3578 8861 5124 806 26204 2877 16679 26448 22802 42168 6228 9616 26909 38792 47291 39283 46040 14916 92127 55017 95020 85740 105770 227507 287010 171257 138619 25023 102916 19607 15596 0 LFQ 91 4026 0 0 0 0 43774 1069 87039 25526 48 36737 3488 9142 4890 816 26800 2925 16932 26962 23530 43036 6199 8878 27004 39397 48157 39910 46527 13928 94303 54517 96649 87075 106878 235018 293742 172131 135893 20715 90198 14759 11382 0 LFQ 92 4113 0 0 0 0 46003 999 89814 25516 62 37570 3685 9519 4692 836 27311 2908 17564 27716 24050 43559 6344 8636 27416 40137 49317 40152 47214 12889 95438 54323 97808 87427 107722 240575 300726 172437 133016 16888 76990 10541 8087 0 LFQ 93 3822 0 0 0 0 46299 1044 92926 26119 65 39380 3757 9540 4415 869 28158 2944 17597 28010 25054 44533 6396 7943 27911 40071 51014 40766 47909 11984 97681 53753 100236 88700 107005 247914 307181 170683 126969 13695 64579 7455 5623 0 LFQ 94 3269 0 0 0 0 47466 924 94684 26257 74 40673 3923 9575 4269 769 28283 3005 18123 28586 25663 45896 6439 7288 28458 40423 52032 40768 48273 11830 99930 53787 101491 90268 106587 255875 312800 169778 119640 10849 53153 5067 3825 0 LFQ 95 3541 0 0 0 0 48996 925 97630 26200 69 41785 3843 2223 11651 792 29032 3191 18522 28788 25891 46464 6403 6791 28709 40883 53810 40598 48688 11137 101620 53021 102601 91723 105748 261677 319426 168905 111188 8364 43189 3391 2585 0 LFQ 96 3805 0 0 0 0 50206 883 100203 26033 66 42287 3942 2267 11285 761 29715 3164 18894 29623 27064 47498 6597 6284 29110 41483 55650 40475 48982 10462 103359 51954 103592 94113 105013 269630 323700 166676 100837 6520 34070 2198 1599 0 LFQ 97 3116 0 0 0 0 51607 936 103247 26348 72 43553 4102 2321 11249 808 30065 3194 19294 29996 27420 48498 6442 5659 29594 41840 57046 40360 49554 9913 105944 51621 105142 95560 103891 276091 328173 163902 90198 4778 26093 1366 1007 0 LFQ 98 2523 0 0 0 0 53297 805 105160 26688 96 45521 4214 2395 11200 747 30990 3163 19395 30026 28365 49310 6329 5098 29926 42514 58686 39626 49911 9701 107348 50943 106350 97232 102135 282669 332501 160744 79860 3467 19624 842 599 0 LFQ 99 3695 0 0 0 0 54770 841 109402 27108 88 46166 4292 2430 10930 769 31720 3193 20056 31164 29385 50618 6283 4673 30393 42714 60916 40286 50131 9269 109363 50379 106670 98662 100601 287825 333925 154755 69065 2400 14188 512 363 0 LFQ 100 1898 0 0 0 0 74772 1595 171725 35238 113 62662 8890 4944 15646 1066 35468 4777 24094 52431 40210 69104 12836 7469 33291 45523 85418 81948 50057 11256 151068 52822 131013 102831 81022 236244 197635 77940 30314 903 5537 145 95 0 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part. GCF 0.25 159 GCF 1.01 291 GCF 2.01 554 GCF 3.02 897 GCF 4.02 1473 GCF 5.03 2315 GCF 6.03 3306 GCF 7.04 4872 GCF 8.04 7039 GCF 9.05 9678 GCF 10.05 12943 GCF 11.06 16742 GCF 12.06 21183 GCF 13.07 26715 GCF 14.07 32555 GCF 15.08 39050 GCF 16.08 46331 GCF 17.09 52875 GCF 18.09 59325 GCF 19.10 64579 GCF 20.10 67520 GCF 21.11 69326 GCF 22.11 70541 GCF 23.12 69393 GCF 24.12 66604 GCF 25.13 62990 GCF 26.13 58370 GCF 27.14 53932 GCF 28.14 51255 GCF 29.15 48392 GCF 30.15 45634 GCF 31.16 43244 GCF 32.16 39602 GCF 33.17 34955 GCF 34.17 29203 GCF 35.18 23940 GCF 36.18 19033 GCF 37.19 15083 GCF 38.19 11986 GCF 39.20 9946 GCF 40.20 8550 GCF 41.21 7713 GCF 42.21 7088 GCF 43.22 6934 GCF 44.22 6867 GCF 45.23 7048 GCF 46.23 7540 GCF 47.24 8457 GCF 48.24 9124 GCF 49.25 10242 GCF 50.25 11968 GCF 51.26 13880 GCF 52.26 16353 GCF 53.27 19241 GCF 54.27 22336 GCF 55.28 26632 GCF 56.28 30665 GCF 57.29 35206 GCF 58.29 38888 GCF 59.30 41940 GCF 60.30 44357 GCF 61.31 45335 GCF 62.31 45278 GCF 63.32 43076 GCF 64.32 39376 GCF 65.33 34745 GCF 66.33 29356 GCF 67.34 23959 GCF 68.34 19276 GCF 69.35 14393 GCF 70.35 10116 GCF 71.36 7236 GCF 72.36 4708 GCF 73.37 3142 GCF 74.37 1965 GCF 75.38 1169 GCF 76.38 706 GCF 77.39 404 GCF 78.39 297 GCF 79.40 211 GCF 80.40 138 GCF 81.41 86 GCF 82.41 57 GCF 83.42 32 GCF 84.42 31 GCF 85.43 22 GCF 86.43 9 GCF 87.94 6 GCF 89.45 4 GCF 90.45 1 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part. GCL 0.25 1487 GCL 1.01 741 GCL 2.01 836 GCL 3.02 1164 GCL 4.02 1668 GCL 5.03 2344 GCL 6.03 3434 GCL 7.04 4585 GCL 8.04 6479 GCL 9.05 8829 GCL 10.05 12038 GCL 11.06 15595 GCL 12.06 19963 GCL 13.07 25062 GCL 14.07 30759 GCL 15.08 37865 GCL 16.08 45086 GCL 17.09 51358 GCL 18.09 58031 GCL 19.10 63865 GCL 20.10 67047 GCL 21.11 69642 GCL 22.11 70760 GCL 23.12 69582 GCL 24.12 66851 GCL 25.13 63682 GCL 26.13 59643 GCL 27.14 55645 GCL 28.14 51652 GCL 29.15 48940 GCL 30.15 46457 GCL 31.16 43590 GCL 32.16 39948 GCL 33.17 35576 GCL 34.17 30013 GCL 35.18 24417 GCL 36.18 19504 GCL 37.19 15596 GCL 38.19 12462 GCL 39.20 10442 GCL 40.20 8940 GCL 41.21 7759 GCL 42.21 7285 GCL 43.22 6753 GCL 44.22 6731 GCL 45.23 6738 GCL 46.23 7213 GCL 47.24 8082 GCL 48.24 8862 GCL 49.25 9738 GCL 50.25 11420 GCL 51.26 13126 GCL 52.26 15557 GCL 53.27 18033 GCL 54.27 21157 GCL 55.28 24866 GCL 56.28 28319 GCL 57.29 32625 GCL 58.29 36192 GCL 59.30 39437 GCL 60.30 41973 GCL 61.31 42792 GCL 62.31 43319 GCL 63.32 41956 GCL 64.32 39423 GCL 65.33 35543 GCL 66.33 30885 GCL 67.34 26335 GCL 68.34 21563 GCL 69.35 16793 GCL 70.35 13177 GCL 71.36 9789 GCL 72.36 6994 GCL 73.37 5144 GCL 74.37 3592 GCL 75.38 2413 GCL 76.38 1824 GCL 77.39 1254 GCL 78.39 892 GCL 79.40 648 GCL 80.40 491 GCL 81.41 359 GCL 82.41 276 GCL 83.42 226 GCL 84.42 170 GCL 85.43 141 GCL 86.43 121 GCL 87.44 92 GCL 88.44 82 GCL 89.45 64 GCL 90.45 32 GCL 91.46 39 GCL 92.46 37 GCL 93.47 34 GCL 94.47 22 GCL 95.48 17 GCL 96.48 4 GCL 97.49 10 GCL 98.49 3 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] GCC 1 33.30 18.30 18.18 30.22 0.09 0.00 GCC 2 34.44 15.42 17.12 33.03 0.13 0.00 GCC 3 32.88 17.40 16.55 33.17 0.12 0.00 GCC 4 32.50 17.40 17.64 32.46 0.13 0.00 GCC 5 32.70 17.11 17.76 32.43 0.13 0.00 GCC 6 32.05 18.09 17.84 32.02 0.12 0.00 GCC 7 32.29 17.49 17.99 32.22 0.11 0.00 GCC 8 32.55 17.54 17.23 32.68 0.11 0.00 GCC 9 32.13 17.77 17.71 32.40 0.10 0.00 GCC 10 32.42 17.49 17.89 32.20 0.10 0.00 GCC 11 32.66 17.30 17.54 32.50 0.10 0.00 GCC 12 32.30 17.75 17.64 32.31 0.09 0.00 GCC 13 32.42 17.55 17.78 32.25 0.10 0.00 GCC 14 32.62 17.37 17.56 32.46 0.09 0.00 GCC 15 32.25 17.77 17.66 32.32 0.10 0.00 GCC 16 32.35 17.62 17.88 32.15 0.09 0.00 GCC 17 32.42 17.47 17.66 32.45 0.10 0.00 GCC 18 32.18 17.87 17.81 32.15 0.11 0.00 GCC 19 32.16 17.75 18.01 32.08 0.12 0.00 GCC 20 32.37 17.61 17.74 32.27 0.12 0.00 GCC 21 32.10 17.93 17.90 32.06 0.11 0.00 GCC 22 32.10 17.87 18.11 31.92 0.11 0.00 GCC 23 32.34 17.69 17.84 32.13 0.09 0.00 GCC 24 32.03 18.03 18.00 31.94 0.10 0.00 GCC 25 32.12 17.84 18.11 31.93 0.10 0.00 GCC 26 32.31 17.70 17.86 32.13 0.12 0.00 GCC 27 31.91 18.04 18.10 31.95 0.11 0.00 GCC 28 32.02 17.95 18.18 31.85 0.11 0.00 GCC 29 32.23 17.74 17.95 32.09 0.10 0.00 GCC 30 31.92 18.08 18.13 31.88 0.10 0.00 GCC 31 32.02 17.97 18.21 31.80 0.08 0.00 GCC 32 32.25 17.73 18.00 32.01 0.09 0.00 GCC 33 31.91 18.07 18.14 31.89 0.09 0.00 GCC 34 32.02 17.97 18.22 31.78 0.08 0.00 GCC 35 32.20 17.78 17.93 32.09 0.09 0.00 GCC 36 31.85 18.12 18.16 31.86 0.10 0.00 GCC 37 31.97 18.03 18.27 31.73 0.11 0.00 GCC 38 32.22 17.79 18.00 31.99 0.11 0.00 GCC 39 31.87 18.13 18.12 31.88 0.12 0.00 GCC 40 31.94 18.00 18.31 31.75 0.10 0.00 GCC 41 32.11 17.84 18.04 32.01 0.10 0.00 GCC 42 31.91 18.10 18.15 31.83 0.07 0.00 GCC 43 31.94 17.98 18.30 31.78 0.07 0.00 GCC 44 32.15 17.80 18.01 32.04 0.08 0.00 GCC 45 31.87 18.13 18.17 31.83 0.08 0.00 GCC 46 31.98 18.02 18.28 31.72 0.06 0.00 GCC 47 32.14 17.82 18.01 32.02 0.06 0.00 GCC 48 31.83 18.19 18.16 31.82 0.07 0.00 GCC 49 31.91 18.03 18.35 31.72 0.06 0.00 GCC 50 32.12 17.86 18.01 32.01 0.06 0.00 GCC 51 31.85 18.16 18.15 31.84 0.08 0.00 GCC 52 31.88 18.06 18.30 31.75 0.06 0.00 GCC 53 32.09 17.86 18.04 32.01 0.08 0.00 GCC 54 31.84 18.18 18.17 31.81 0.09 0.00 GCC 55 31.95 18.02 18.31 31.71 0.10 0.00 GCC 56 32.12 17.82 18.05 32.01 0.13 0.00 GCC 57 31.85 18.16 18.21 31.78 0.14 0.00 GCC 58 31.92 18.06 18.30 31.72 0.15 0.00 GCC 59 32.09 17.85 18.06 31.99 0.14 0.00 GCC 60 31.86 18.18 18.20 31.77 0.14 0.00 GCC 61 31.92 18.06 18.33 31.69 0.09 0.00 GCC 62 32.10 17.85 18.05 31.99 0.08 0.00 GCC 63 31.78 18.17 18.21 31.84 0.08 0.00 GCC 64 31.88 18.07 18.37 31.69 0.07 0.00 GCC 65 32.12 17.86 18.11 31.91 0.07 0.00 GCC 66 31.80 18.23 18.21 31.75 0.07 0.00 GCC 67 31.88 18.05 18.35 31.72 0.08 0.00 GCC 68 32.06 17.87 18.13 31.94 0.10 0.00 GCC 69 31.74 18.20 18.28 31.78 0.09 0.00 GCC 70 31.86 18.09 18.38 31.67 0.09 0.00 GCC 71 32.03 17.88 18.16 31.93 0.08 0.00 GCC 72 31.76 18.24 18.28 31.71 0.08 0.00 GCC 73 31.82 18.10 18.42 31.66 0.09 0.00 GCC 74 32.07 17.91 18.12 31.90 0.12 0.00 GCC 75 31.79 18.22 18.29 31.70 0.16 0.00 GCC 76 31.86 18.07 18.38 31.70 0.15 0.00 GCC 77 32.08 17.89 18.17 31.85 0.16 0.00 GCC 78 31.77 18.22 18.29 31.72 0.18 0.00 GCC 79 31.88 18.08 18.39 31.66 0.15 0.00 GCC 80 32.03 17.92 18.18 31.87 0.11 0.00 GCC 81 31.77 18.22 18.29 31.73 0.09 0.00 GCC 82 31.84 18.14 18.41 31.61 0.07 0.00 GCC 83 32.02 17.93 18.19 31.85 0.09 0.00 GCC 84 31.74 18.24 18.31 31.71 0.09 0.00 GCC 85 31.81 18.11 18.48 31.59 0.09 0.00 GCC 86 31.99 17.99 18.18 31.84 0.08 0.00 GCC 87 31.70 18.29 18.35 31.66 0.07 0.00 GCC 88 31.79 18.14 18.45 31.62 0.07 0.00 GCC 89 31.96 17.99 18.23 31.82 0.09 0.00 GCC 90 31.67 18.36 18.36 31.61 0.09 0.00 GCC 91 31.76 18.20 18.51 31.53 0.10 0.00 GCC 92 31.96 18.02 18.25 31.78 0.10 0.00 GCC 93 31.73 18.30 18.40 31.57 0.10 0.00 GCC 94 31.77 18.19 18.52 31.52 0.08 0.00 GCC 95 31.90 18.08 18.25 31.77 0.09 0.00 GCC 96 31.66 18.35 18.41 31.58 0.10 0.00 GCC 97 31.74 18.23 18.53 31.50 0.08 0.00 GCC 98 31.89 18.07 18.31 31.73 0.06 0.00 GCC 99 31.62 18.39 18.45 31.54 0.09 0.00 GCC 100 31.66 18.65 18.35 31.34 0.22 0.00 # ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] FBC 1 33.36 18.23 17.94 30.46 0.01 0.00 FBC 2 34.36 15.47 16.75 33.42 0.00 0.00 FBC 3 33.01 17.29 16.16 33.54 0.00 0.00 FBC 4 32.88 17.10 17.15 32.87 0.01 0.00 FBC 5 32.80 16.95 17.68 32.57 0.00 0.00 FBC 6 32.18 17.88 17.70 32.24 0.00 0.00 FBC 7 32.44 17.37 17.81 32.38 0.00 0.00 FBC 8 32.64 17.49 17.16 32.71 0.00 0.00 FBC 9 32.16 17.71 17.64 32.49 0.00 0.00 FBC 10 32.48 17.41 17.76 32.34 0.00 0.00 FBC 11 32.68 17.27 17.45 32.60 0.00 0.00 FBC 12 32.30 17.74 17.58 32.37 0.00 0.00 FBC 13 32.50 17.49 17.71 32.29 0.00 0.00 FBC 14 32.60 17.40 17.48 32.53 0.00 0.00 FBC 15 32.27 17.73 17.60 32.40 0.00 0.00 FBC 16 32.42 17.58 17.79 32.21 0.00 0.00 FBC 17 32.47 17.46 17.57 32.50 0.00 0.00 FBC 18 32.25 17.83 17.70 32.21 0.01 0.00 FBC 19 32.24 17.67 17.93 32.16 0.00 0.00 FBC 20 32.38 17.60 17.67 32.36 0.00 0.00 FBC 21 32.18 17.88 17.81 32.12 0.00 0.00 FBC 22 32.15 17.81 18.04 32.00 0.00 0.00 FBC 23 32.35 17.66 17.77 32.22 0.00 0.00 FBC 24 32.12 17.98 17.90 32.00 0.00 0.00 FBC 25 32.17 17.77 18.04 32.02 0.00 0.00 FBC 26 32.35 17.66 17.78 32.21 0.00 0.00 FBC 27 31.94 17.98 18.06 32.03 0.00 0.00 FBC 28 32.03 17.87 18.10 31.99 0.00 0.00 FBC 29 32.21 17.69 17.93 32.17 0.00 0.00 FBC 30 31.92 18.02 18.10 31.95 0.00 0.00 FBC 31 32.01 17.91 18.15 31.93 0.00 0.00 FBC 32 32.31 17.68 17.91 32.10 0.00 0.00 FBC 33 31.97 18.01 18.07 31.96 0.00 0.00 FBC 34 32.04 17.91 18.11 31.95 0.00 0.00 FBC 35 32.25 17.71 17.87 32.18 0.00 0.00 FBC 36 31.91 18.08 18.10 31.91 0.00 0.00 FBC 37 32.01 17.98 18.21 31.80 0.00 0.00 FBC 38 32.23 17.82 17.89 32.06 0.00 0.00 FBC 39 31.88 18.10 18.02 32.01 0.00 0.00 FBC 40 32.02 17.95 18.20 31.83 0.00 0.00 FBC 41 32.14 17.79 17.94 32.13 0.00 0.00 FBC 42 31.94 18.06 18.10 31.90 0.00 0.00 FBC 43 31.97 17.97 18.24 31.83 0.00 0.00 FBC 44 32.13 17.76 17.98 32.13 0.00 0.00 FBC 45 31.90 18.08 18.13 31.89 0.00 0.00 FBC 46 32.00 17.99 18.21 31.81 0.00 0.00 FBC 47 32.14 17.77 17.95 32.13 0.00 0.00 FBC 48 31.87 18.13 18.08 31.93 0.00 0.00 FBC 49 31.94 17.99 18.24 31.83 0.00 0.00 FBC 50 32.14 17.83 17.95 32.08 0.00 0.00 FBC 51 31.90 18.12 18.07 31.91 0.00 0.00 FBC 52 31.90 18.04 18.20 31.86 0.00 0.00 FBC 53 32.11 17.81 17.99 32.09 0.00 0.00 FBC 54 31.87 18.13 18.14 31.87 0.01 0.00 FBC 55 32.03 18.00 18.21 31.76 0.00 0.00 FBC 56 32.14 17.78 18.00 32.08 0.01 0.00 FBC 57 31.93 18.08 18.14 31.85 0.04 0.00 FBC 58 31.95 18.04 18.17 31.85 0.04 0.00 FBC 59 32.10 17.83 18.00 32.06 0.00 0.00 FBC 60 31.89 18.14 18.13 31.85 0.00 0.00 FBC 61 31.98 18.03 18.20 31.79 0.00 0.00 FBC 62 32.14 17.84 17.95 32.08 0.00 0.00 FBC 63 31.83 18.11 18.11 31.95 0.00 0.00 FBC 64 31.87 18.05 18.29 31.79 0.00 0.00 FBC 65 32.13 17.85 18.01 32.00 0.00 0.00 FBC 66 31.87 18.18 18.13 31.82 0.00 0.00 FBC 67 31.92 18.02 18.26 31.80 0.00 0.00 FBC 68 32.04 17.86 18.07 32.04 0.00 0.00 FBC 69 31.78 18.14 18.17 31.90 0.00 0.00 FBC 70 31.95 18.02 18.27 31.76 0.00 0.00 FBC 71 32.08 17.85 18.07 32.01 0.00 0.00 FBC 72 31.78 18.20 18.19 31.83 0.00 0.00 FBC 73 31.84 18.06 18.32 31.78 0.00 0.00 FBC 74 32.09 17.89 18.02 32.00 0.00 0.00 FBC 75 31.87 18.18 18.20 31.75 0.00 0.00 FBC 76 31.90 18.01 18.24 31.85 0.00 0.00 FBC 77 32.14 17.85 18.08 31.94 0.00 0.00 FBC 78 31.82 18.19 18.16 31.84 0.00 0.00 FBC 79 31.99 18.03 18.24 31.74 0.00 0.00 FBC 80 32.10 17.87 18.01 32.02 0.00 0.00 FBC 81 31.83 18.15 18.16 31.86 0.00 0.00 FBC 82 31.91 18.08 18.25 31.75 0.00 0.00 FBC 83 32.13 17.86 18.04 31.97 0.00 0.00 FBC 84 31.84 18.23 18.12 31.81 0.00 0.00 FBC 85 31.89 18.06 18.33 31.72 0.00 0.00 FBC 86 32.07 17.95 18.02 31.96 0.00 0.00 FBC 87 31.82 18.24 18.18 31.77 0.00 0.00 FBC 88 31.87 18.08 18.26 31.79 0.00 0.00 FBC 89 32.02 17.92 18.06 31.99 0.00 0.00 FBC 90 31.77 18.28 18.16 31.78 0.00 0.00 FBC 91 31.84 18.15 18.31 31.70 0.00 0.00 FBC 92 32.10 17.94 18.05 31.92 0.00 0.00 FBC 93 31.85 18.21 18.18 31.76 0.00 0.00 FBC 94 31.89 18.14 18.28 31.70 0.00 0.00 FBC 95 32.02 18.01 18.00 31.97 0.00 0.00 FBC 96 31.82 18.26 18.15 31.77 0.00 0.00 FBC 97 31.86 18.16 18.27 31.71 0.00 0.00 FBC 98 32.03 18.00 18.05 31.92 0.00 0.00 FBC 99 31.74 18.32 18.22 31.72 0.00 0.00 FBC 100 32.29 18.54 17.13 32.03 0.34 0.00 # ACGT raw counters for first fragments. Use `grep ^FTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters FTC 64240142 35764296 35945522 64040467 9573 # ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] LBC 1 33.24 18.36 18.42 29.98 0.17 0.00 LBC 2 34.51 15.36 17.49 32.63 0.26 0.00 LBC 3 32.75 17.50 16.94 32.81 0.24 0.00 LBC 4 32.11 17.70 18.14 32.04 0.25 0.00 LBC 5 32.60 17.28 17.83 32.29 0.26 0.00 LBC 6 31.91 18.30 17.99 31.80 0.24 0.00 LBC 7 32.14 17.61 18.18 32.07 0.23 0.00 LBC 8 32.46 17.59 17.29 32.66 0.22 0.00 LBC 9 32.09 17.83 17.78 32.30 0.19 0.00 LBC 10 32.35 17.57 18.01 32.06 0.20 0.00 LBC 11 32.64 17.33 17.62 32.41 0.20 0.00 LBC 12 32.29 17.76 17.70 32.25 0.18 0.00 LBC 13 32.34 17.60 17.85 32.21 0.19 0.00 LBC 14 32.64 17.34 17.63 32.39 0.17 0.00 LBC 15 32.23 17.80 17.73 32.24 0.19 0.00 LBC 16 32.27 17.66 17.98 32.09 0.19 0.00 LBC 17 32.38 17.48 17.74 32.40 0.20 0.00 LBC 18 32.10 17.91 17.91 32.09 0.22 0.00 LBC 19 32.09 17.83 18.09 31.99 0.24 0.00 LBC 20 32.36 17.63 17.82 32.19 0.23 0.00 LBC 21 32.02 17.98 17.99 32.01 0.21 0.00 LBC 22 32.05 17.92 18.19 31.84 0.21 0.00 LBC 23 32.32 17.73 17.91 32.04 0.19 0.00 LBC 24 31.94 18.09 18.09 31.88 0.20 0.00 LBC 25 32.07 17.91 18.18 31.84 0.20 0.00 LBC 26 32.26 17.75 17.94 32.05 0.23 0.00 LBC 27 31.88 18.10 18.15 31.87 0.23 0.00 LBC 28 32.00 18.02 18.27 31.71 0.21 0.00 LBC 29 32.25 17.79 17.97 32.00 0.21 0.00 LBC 30 31.92 18.13 18.16 31.80 0.19 0.00 LBC 31 32.03 18.04 18.26 31.67 0.16 0.00 LBC 32 32.20 17.78 18.10 31.92 0.19 0.00 LBC 33 31.85 18.13 18.20 31.82 0.19 0.00 LBC 34 32.01 18.03 18.34 31.62 0.15 0.00 LBC 35 32.16 17.85 17.98 32.00 0.18 0.00 LBC 36 31.80 18.16 18.23 31.81 0.19 0.00 LBC 37 31.93 18.08 18.32 31.67 0.22 0.00 LBC 38 32.20 17.77 18.12 31.92 0.22 0.00 LBC 39 31.85 18.17 18.22 31.75 0.25 0.00 LBC 40 31.87 18.06 18.41 31.66 0.19 0.00 LBC 41 32.08 17.88 18.15 31.89 0.20 0.00 LBC 42 31.89 18.15 18.19 31.77 0.14 0.00 LBC 43 31.92 17.99 18.36 31.73 0.14 0.00 LBC 44 32.16 17.84 18.05 31.95 0.15 0.00 LBC 45 31.83 18.18 18.21 31.77 0.16 0.00 LBC 46 31.97 18.04 18.35 31.64 0.13 0.00 LBC 47 32.14 17.87 18.08 31.92 0.12 0.00 LBC 48 31.79 18.25 18.24 31.72 0.13 0.00 LBC 49 31.88 18.06 18.45 31.61 0.12 0.00 LBC 50 32.10 17.89 18.07 31.93 0.12 0.00 LBC 51 31.80 18.21 18.22 31.76 0.15 0.00 LBC 52 31.87 18.08 18.41 31.65 0.12 0.00 LBC 53 32.07 17.91 18.10 31.93 0.17 0.00 LBC 54 31.82 18.22 18.20 31.76 0.18 0.00 LBC 55 31.87 18.05 18.41 31.66 0.19 0.00 LBC 56 32.11 17.85 18.10 31.95 0.24 0.00 LBC 57 31.77 18.24 18.27 31.72 0.24 0.00 LBC 58 31.89 18.08 18.43 31.60 0.25 0.00 LBC 59 32.08 17.87 18.12 31.92 0.29 0.00 LBC 60 31.84 18.21 18.27 31.68 0.29 0.00 LBC 61 31.86 18.10 18.45 31.58 0.18 0.00 LBC 62 32.07 17.86 18.16 31.91 0.17 0.00 LBC 63 31.74 18.23 18.30 31.73 0.16 0.00 LBC 64 31.88 18.09 18.45 31.59 0.15 0.00 LBC 65 32.10 17.87 18.21 31.83 0.14 0.00 LBC 66 31.74 18.28 18.30 31.69 0.15 0.00 LBC 67 31.85 18.08 18.44 31.64 0.17 0.00 LBC 68 32.07 17.88 18.20 31.85 0.20 0.00 LBC 69 31.70 18.26 18.38 31.66 0.18 0.00 LBC 70 31.76 18.17 18.48 31.59 0.17 0.00 LBC 71 31.98 17.92 18.24 31.86 0.17 0.00 LBC 72 31.74 18.29 18.37 31.60 0.17 0.00 LBC 73 31.81 18.14 18.51 31.54 0.18 0.00 LBC 74 32.05 17.92 18.22 31.81 0.24 0.00 LBC 75 31.71 18.25 18.39 31.65 0.32 0.00 LBC 76 31.81 18.13 18.52 31.54 0.30 0.00 LBC 77 32.02 17.94 18.27 31.77 0.32 0.00 LBC 78 31.71 18.26 18.43 31.60 0.35 0.00 LBC 79 31.77 18.13 18.53 31.57 0.29 0.00 LBC 80 31.96 17.98 18.34 31.73 0.22 0.00 LBC 81 31.70 18.29 18.41 31.60 0.18 0.00 LBC 82 31.77 18.20 18.57 31.46 0.13 0.00 LBC 83 31.92 18.00 18.34 31.74 0.17 0.00 LBC 84 31.65 18.26 18.49 31.60 0.18 0.00 LBC 85 31.74 18.16 18.64 31.46 0.18 0.00 LBC 86 31.91 18.03 18.34 31.71 0.16 0.00 LBC 87 31.59 18.35 18.51 31.55 0.14 0.00 LBC 88 31.72 18.20 18.64 31.45 0.14 0.00 LBC 89 31.89 18.06 18.41 31.64 0.17 0.00 LBC 90 31.57 18.44 18.55 31.43 0.19 0.00 LBC 91 31.69 18.24 18.71 31.36 0.20 0.00 LBC 92 31.82 18.10 18.44 31.64 0.21 0.00 LBC 93 31.61 18.40 18.61 31.38 0.19 0.00 LBC 94 31.66 18.24 18.77 31.34 0.16 0.00 LBC 95 31.78 18.15 18.50 31.57 0.18 0.00 LBC 96 31.51 18.43 18.67 31.39 0.19 0.00 LBC 97 31.62 18.30 18.79 31.29 0.16 0.00 LBC 98 31.75 18.14 18.56 31.55 0.13 0.00 LBC 99 31.50 18.46 18.68 31.36 0.19 0.00 LBC 100 31.04 18.75 19.56 30.65 0.09 0.00 # ACGT raw counters for last fragments. Use `grep ^LTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters LTC 63870630 35905807 36394939 63441474 387150 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs IS 0 92 0 2 90 IS 1 6 0 3 3 IS 2 11 0 9 2 IS 3 11 0 11 0 IS 4 15 0 14 1 IS 5 12 0 11 1 IS 6 14 0 14 0 IS 7 12 0 12 0 IS 8 14 0 14 0 IS 9 13 0 13 0 IS 10 12 0 12 0 IS 11 16 0 16 0 IS 12 20 0 20 0 IS 13 19 0 19 0 IS 14 19 0 19 0 IS 15 23 0 22 1 IS 16 21 0 20 1 IS 17 17 0 13 4 IS 18 21 0 17 4 IS 19 249 92 156 1 IS 20 163 73 89 1 IS 21 90 36 53 1 IS 22 69 29 39 1 IS 23 75 25 48 2 IS 24 62 17 39 6 IS 25 51 15 34 2 IS 26 75 21 46 8 IS 27 49 21 26 2 IS 28 69 26 38 5 IS 29 61 25 32 4 IS 30 65 17 39 9 IS 31 57 20 31 6 IS 32 81 26 47 8 IS 33 75 25 42 8 IS 34 84 30 47 7 IS 35 92 43 37 12 IS 36 79 30 39 10 IS 37 83 36 41 6 IS 38 87 33 43 11 IS 39 69 35 28 6 IS 40 77 28 43 6 IS 41 71 27 37 7 IS 42 69 22 38 9 IS 43 82 32 39 11 IS 44 62 23 29 10 IS 45 95 47 40 8 IS 46 75 27 37 11 IS 47 89 44 35 10 IS 48 86 34 43 9 IS 49 72 33 27 12 IS 50 93 44 41 8 IS 51 96 41 47 8 IS 52 78 28 42 8 IS 53 99 47 41 11 IS 54 79 42 32 5 IS 55 137 69 59 9 IS 56 138 74 52 12 IS 57 106 53 47 6 IS 58 123 64 52 7 IS 59 85 36 41 8 IS 60 111 66 34 11 IS 61 135 72 56 7 IS 62 110 46 54 10 IS 63 130 63 61 6 IS 64 127 60 59 8 IS 65 127 61 53 13 IS 66 140 67 65 8 IS 67 135 54 66 15 IS 68 137 65 67 5 IS 69 128 50 73 5 IS 70 149 81 58 10 IS 71 162 81 72 9 IS 72 150 84 62 4 IS 73 168 82 80 6 IS 74 179 100 74 5 IS 75 184 91 83 10 IS 76 167 87 70 10 IS 77 166 84 77 5 IS 78 166 92 69 5 IS 79 193 102 83 8 IS 80 195 106 84 5 IS 81 190 115 67 8 IS 82 196 118 66 12 IS 83 183 110 67 6 IS 84 215 139 63 13 IS 85 219 150 65 4 IS 86 194 110 77 7 IS 87 219 137 74 8 IS 88 208 120 81 7 IS 89 232 142 78 12 IS 90 227 147 74 6 IS 91 208 126 70 12 IS 92 231 147 76 8 IS 93 232 150 70 12 IS 94 230 149 72 9 IS 95 268 167 93 8 IS 96 300 195 101 4 IS 97 291 193 89 9 IS 98 314 196 106 12 IS 99 300 150 138 12 IS 100 339 250 83 6 IS 101 285 264 10 11 IS 102 298 282 7 9 IS 103 281 268 3 10 IS 104 306 293 4 9 IS 105 344 329 6 9 IS 106 294 282 3 9 IS 107 372 365 1 6 IS 108 334 321 3 10 IS 109 364 357 0 7 IS 110 422 414 1 7 IS 111 382 364 5 13 IS 112 391 381 1 9 IS 113 393 381 3 9 IS 114 410 398 1 11 IS 115 412 405 0 7 IS 116 423 407 2 14 IS 117 465 460 0 5 IS 118 463 457 1 5 IS 119 499 493 0 6 IS 120 524 512 4 8 IS 121 576 573 0 3 IS 122 575 565 0 10 IS 123 663 647 1 15 IS 124 642 634 0 8 IS 125 679 670 1 8 IS 126 728 718 1 9 IS 127 815 803 0 12 IS 128 882 872 2 8 IS 129 877 870 0 7 IS 130 932 919 2 11 IS 131 1125 1115 0 10 IS 132 1116 1107 1 8 IS 133 1227 1218 0 9 IS 134 1277 1275 0 2 IS 135 1407 1403 1 3 IS 136 1444 1435 0 9 IS 137 1598 1588 1 9 IS 138 1752 1742 1 9 IS 139 1870 1863 1 6 IS 140 1928 1918 1 9 IS 141 2153 2147 0 6 IS 142 2273 2266 1 6 IS 143 2412 2396 2 14 IS 144 2560 2550 1 9 IS 145 2753 2742 1 10 IS 146 2874 2866 2 6 IS 147 3095 3090 1 4 IS 148 3278 3267 2 9 IS 149 3555 3544 3 8 IS 150 3721 3711 3 7 IS 151 4007 3992 2 13 IS 152 4349 4344 0 5 IS 153 4385 4379 1 5 IS 154 4625 4613 1 11 IS 155 4898 4892 0 6 IS 156 5068 5062 0 6 IS 157 5472 5464 0 8 IS 158 5398 5390 1 7 IS 159 5650 5641 1 8 IS 160 6045 6039 2 4 IS 161 6480 6473 3 4 IS 162 6598 6590 2 6 IS 163 6807 6797 4 6 IS 164 6935 6929 2 4 IS 165 7281 7276 0 5 IS 166 7409 7397 2 10 IS 167 7661 7658 0 3 IS 168 7807 7801 2 4 IS 169 8180 8171 2 7 IS 170 8275 8269 2 4 IS 171 8498 8492 1 5 IS 172 8673 8668 1 4 IS 173 8833 8826 1 6 IS 174 8928 8919 5 4 IS 175 8997 8987 1 9 IS 176 9300 9290 1 9 IS 177 9340 9333 2 5 IS 178 9440 9433 4 3 IS 179 9491 9479 1 11 IS 180 9563 9559 1 3 IS 181 9680 9674 2 4 IS 182 9764 9758 1 5 IS 183 10038 10028 2 8 IS 184 9942 9936 0 6 IS 185 10191 10189 0 2 IS 186 9973 9970 0 3 IS 187 10355 10350 2 3 IS 188 10129 10124 2 3 IS 189 10254 10246 2 6 IS 190 10234 10230 0 4 IS 191 10236 10232 0 4 IS 192 10036 10025 1 10 IS 193 10087 10081 1 5 IS 194 10104 10096 0 8 IS 195 10279 10274 1 4 IS 196 10244 10239 2 3 IS 197 10102 10097 0 5 IS 198 10141 10139 1 1 IS 199 9957 9952 3 2 IS 200 9896 9891 3 2 IS 201 9875 9871 1 3 IS 202 9854 9852 0 2 IS 203 9734 9729 2 3 IS 204 9461 9458 2 1 IS 205 9592 9589 0 3 IS 206 9479 9473 1 5 IS 207 9603 9598 1 4 IS 208 9422 9417 2 3 IS 209 9283 9282 0 1 IS 210 9125 9118 2 5 IS 211 8861 8857 2 2 IS 212 8993 8991 1 1 IS 213 8972 8969 0 3 IS 214 8701 8699 0 2 IS 215 8653 8648 2 3 IS 216 8690 8690 0 0 IS 217 8503 8499 1 3 IS 218 8303 8303 0 0 IS 219 8426 8420 0 6 IS 220 8160 8157 0 3 IS 221 8257 8251 1 5 IS 222 8099 8097 0 2 IS 223 7842 7842 0 0 IS 224 8005 8002 0 3 IS 225 7721 7718 0 3 IS 226 7741 7737 0 4 IS 227 7481 7479 0 2 IS 228 7509 7509 0 0 IS 229 7416 7413 1 2 IS 230 7396 7392 1 3 IS 231 7155 7153 0 2 IS 232 7152 7150 0 2 IS 233 7046 7042 1 3 IS 234 6908 6905 1 2 IS 235 6713 6712 0 1 IS 236 6681 6679 0 2 IS 237 6515 6515 0 0 IS 238 6525 6522 0 3 IS 239 6323 6322 1 0 IS 240 6255 6252 0 3 IS 241 6223 6222 0 1 IS 242 6127 6125 0 2 IS 243 5965 5963 0 2 IS 244 6053 6044 1 8 IS 245 5784 5780 0 4 IS 246 5723 5718 1 4 IS 247 5676 5673 2 1 IS 248 5589 5586 1 2 IS 249 5483 5481 2 0 IS 250 5509 5506 0 3 IS 251 5360 5360 0 0 IS 252 5250 5248 0 2 IS 253 5070 5068 2 0 IS 254 5057 5055 0 2 IS 255 4853 4852 0 1 IS 256 4903 4902 0 1 IS 257 4928 4926 2 0 IS 258 4972 4971 0 1 IS 259 4746 4746 0 0 IS 260 4709 4707 0 2 IS 261 4567 4566 0 1 IS 262 4495 4492 2 1 IS 263 4414 4414 0 0 IS 264 4306 4305 1 0 IS 265 4143 4143 0 0 IS 266 4327 4325 1 1 IS 267 4149 4148 0 1 IS 268 4002 4001 1 0 IS 269 3981 3980 1 0 IS 270 4049 4047 1 1 IS 271 3902 3901 1 0 IS 272 3876 3872 3 1 IS 273 3725 3724 1 0 IS 274 3704 3704 0 0 IS 275 3622 3619 1 2 IS 276 3547 3546 1 0 IS 277 3616 3615 0 1 IS 278 3447 3447 0 0 IS 279 3339 3337 1 1 IS 280 3293 3292 0 1 IS 281 3249 3246 0 3 IS 282 3164 3163 0 1 IS 283 3157 3154 2 1 IS 284 3070 3069 0 1 IS 285 3063 3062 0 1 IS 286 3013 3011 1 1 IS 287 2890 2889 1 0 IS 288 2833 2832 1 0 IS 289 2782 2782 0 0 IS 290 2658 2656 2 0 IS 291 2718 2717 0 1 IS 292 2701 2699 1 1 IS 293 2639 2636 1 2 IS 294 2582 2581 0 1 IS 295 2730 2728 1 1 IS 296 2525 2523 1 1 IS 297 2453 2451 1 1 IS 298 2366 2365 1 0 IS 299 2349 2348 1 0 IS 300 2383 2383 0 0 IS 301 2275 2275 0 0 IS 302 2237 2236 1 0 IS 303 2189 2188 1 0 IS 304 2196 2195 0 1 IS 305 2120 2119 1 0 IS 306 1987 1986 0 1 IS 307 2034 2032 1 1 IS 308 1962 1960 2 0 IS 309 2039 2038 1 0 IS 310 1890 1887 1 2 IS 311 1944 1941 2 1 IS 312 1877 1875 0 2 IS 313 1862 1862 0 0 IS 314 1819 1819 0 0 IS 315 1807 1807 0 0 IS 316 1698 1697 0 1 IS 317 1758 1755 2 1 IS 318 1686 1684 1 1 IS 319 1585 1585 0 0 IS 320 1662 1660 1 1 IS 321 1525 1523 1 1 IS 322 1476 1474 2 0 IS 323 1530 1529 0 1 IS 324 1471 1470 0 1 IS 325 1479 1477 1 1 IS 326 1416 1416 0 0 IS 327 1493 1491 1 1 IS 328 1329 1328 1 0 IS 329 1377 1376 1 0 IS 330 1330 1330 0 0 IS 331 1378 1378 0 0 IS 332 1235 1234 1 0 IS 333 1249 1248 1 0 IS 334 1162 1162 0 0 IS 335 1210 1207 2 1 IS 336 1181 1181 0 0 IS 337 1092 1092 0 0 IS 338 1158 1157 1 0 IS 339 1125 1125 0 0 IS 340 1073 1073 0 0 IS 341 1096 1095 1 0 IS 342 1061 1058 2 1 IS 343 1019 1018 1 0 IS 344 1010 1008 1 1 IS 345 1070 1067 2 1 IS 346 990 989 1 0 IS 347 944 941 3 0 IS 348 941 940 0 1 IS 349 930 929 0 1 IS 350 878 878 0 0 IS 351 954 954 0 0 IS 352 943 943 0 0 IS 353 841 841 0 0 IS 354 794 794 0 0 IS 355 845 844 1 0 IS 356 762 759 3 0 IS 357 832 832 0 0 IS 358 802 802 0 0 IS 359 739 739 0 0 IS 360 775 774 1 0 IS 361 740 739 0 1 IS 362 713 713 0 0 IS 363 698 697 1 0 IS 364 711 709 2 0 IS 365 679 676 2 1 IS 366 672 672 0 0 IS 367 614 614 0 0 IS 368 617 617 0 0 IS 369 652 651 1 0 IS 370 603 602 0 1 IS 371 589 588 1 0 IS 372 553 552 1 0 IS 373 607 607 0 0 IS 374 581 581 0 0 IS 375 541 540 1 0 IS 376 538 537 1 0 IS 377 523 520 3 0 IS 378 525 524 1 0 IS 379 533 531 2 0 IS 380 486 483 3 0 IS 381 489 489 0 0 IS 382 449 449 0 0 IS 383 489 488 1 0 IS 384 502 501 1 0 IS 385 468 467 1 0 IS 386 476 473 3 0 IS 387 454 453 1 0 IS 388 440 440 0 0 IS 389 408 408 0 0 IS 390 430 428 1 1 IS 391 422 421 1 0 IS 392 394 394 0 0 IS 393 374 374 0 0 IS 394 363 363 0 0 IS 395 387 387 0 0 IS 396 370 370 0 0 IS 397 358 358 0 0 IS 398 347 347 0 0 IS 399 346 345 0 1 IS 400 332 332 0 0 IS 401 342 342 0 0 IS 402 338 337 1 0 IS 403 310 309 0 1 IS 404 296 296 0 0 IS 405 331 328 3 0 IS 406 298 298 0 0 IS 407 309 307 2 0 IS 408 298 297 1 0 IS 409 265 263 2 0 IS 410 299 299 0 0 IS 411 264 263 0 1 IS 412 272 272 0 0 IS 413 259 259 0 0 IS 414 281 281 0 0 IS 415 240 239 1 0 IS 416 259 257 2 0 IS 417 226 224 2 0 IS 418 241 241 0 0 IS 419 248 248 0 0 IS 420 228 226 2 0 IS 421 203 200 3 0 IS 422 213 213 0 0 IS 423 230 229 1 0 IS 424 201 200 1 0 IS 425 176 175 1 0 IS 426 190 189 1 0 IS 427 190 190 0 0 IS 428 189 187 1 1 IS 429 194 193 1 0 IS 430 170 168 2 0 IS 431 156 155 1 0 IS 432 181 181 0 0 IS 433 201 200 1 0 IS 434 172 172 0 0 IS 435 177 175 2 0 IS 436 151 150 1 0 IS 437 144 144 0 0 IS 438 147 147 0 0 IS 439 176 175 1 0 IS 440 150 150 0 0 IS 441 135 135 0 0 IS 442 134 133 0 1 IS 443 143 141 2 0 IS 444 122 122 0 0 IS 445 125 125 0 0 IS 446 135 134 1 0 IS 447 129 128 1 0 IS 448 112 111 1 0 IS 449 133 132 1 0 IS 450 99 98 1 0 IS 451 111 111 0 0 IS 452 107 107 0 0 IS 453 100 99 1 0 IS 454 101 101 0 0 IS 455 111 111 0 0 IS 456 95 94 1 0 IS 457 124 124 0 0 IS 458 118 117 1 0 IS 459 117 115 2 0 IS 460 88 85 3 0 IS 461 98 98 0 0 IS 462 96 94 2 0 IS 463 87 87 0 0 IS 464 77 76 1 0 IS 465 81 81 0 0 IS 466 75 75 0 0 IS 467 83 83 0 0 IS 468 62 62 0 0 IS 469 70 67 3 0 IS 470 68 68 0 0 IS 471 66 65 1 0 IS 472 60 60 0 0 IS 473 62 62 0 0 IS 474 64 62 1 1 IS 475 66 65 1 0 IS 476 56 56 0 0 IS 477 54 52 2 0 IS 478 54 53 1 0 IS 479 52 52 0 0 IS 480 48 47 1 0 IS 481 46 45 1 0 IS 482 56 55 1 0 IS 483 47 47 0 0 IS 484 48 46 2 0 IS 485 44 44 0 0 IS 486 48 47 1 0 IS 487 41 38 3 0 IS 488 37 37 0 0 IS 489 35 35 0 0 IS 490 51 51 0 0 IS 491 42 41 1 0 IS 492 47 46 1 0 IS 493 32 30 2 0 IS 494 39 37 2 0 IS 495 49 48 1 0 IS 496 35 35 0 0 IS 497 33 30 3 0 IS 498 38 38 0 0 IS 499 44 44 0 0 IS 500 32 31 1 0 IS 501 39 36 3 0 IS 502 29 28 1 0 IS 503 32 31 1 0 IS 504 25 25 0 0 IS 505 30 30 0 0 IS 506 31 31 0 0 IS 507 20 19 1 0 IS 508 26 25 1 0 IS 509 31 29 2 0 IS 510 30 28 2 0 IS 511 28 26 2 0 IS 512 29 29 0 0 IS 513 22 22 0 0 IS 514 25 25 0 0 IS 515 29 28 1 0 IS 516 24 24 0 0 IS 517 33 32 1 0 IS 518 28 28 0 0 IS 519 23 23 0 0 IS 520 30 30 0 0 IS 521 16 16 0 0 IS 522 24 24 0 0 IS 523 24 24 0 0 IS 524 21 21 0 0 IS 525 24 23 1 0 IS 526 16 15 0 1 IS 527 16 15 1 0 IS 528 15 14 1 0 IS 529 20 20 0 0 IS 530 26 23 3 0 IS 531 15 15 0 0 IS 532 21 19 2 0 IS 533 22 21 1 0 IS 534 20 16 4 0 IS 535 13 13 0 0 IS 536 21 20 1 0 IS 537 16 14 2 0 IS 538 22 22 0 0 IS 539 14 13 1 0 IS 540 17 15 2 0 IS 541 12 11 1 0 IS 542 17 17 0 0 IS 543 11 11 0 0 IS 544 10 8 2 0 IS 545 10 9 0 1 IS 546 15 14 1 0 IS 547 15 14 1 0 IS 548 14 11 3 0 IS 549 15 13 2 0 IS 550 8 7 1 0 IS 551 12 11 1 0 IS 552 15 14 1 0 IS 553 11 11 0 0 IS 554 10 9 1 0 IS 555 9 9 0 0 IS 556 15 15 0 0 IS 557 13 13 0 0 IS 558 10 10 0 0 IS 559 11 11 0 0 IS 560 9 9 0 0 IS 561 11 11 0 0 IS 562 11 9 2 0 IS 563 8 8 0 0 IS 564 9 9 0 0 IS 565 13 13 0 0 IS 566 9 8 1 0 IS 567 7 6 1 0 IS 568 5 5 0 0 IS 569 8 7 1 0 IS 570 8 8 0 0 IS 571 12 11 1 0 IS 572 11 11 0 0 IS 573 9 8 1 0 IS 574 6 6 0 0 IS 575 9 8 1 0 IS 576 9 7 2 0 IS 577 10 9 1 0 IS 578 6 5 1 0 IS 579 3 3 0 0 IS 580 10 9 1 0 IS 581 5 4 1 0 IS 582 11 9 2 0 IS 583 8 7 1 0 IS 584 11 11 0 0 IS 585 12 12 0 0 IS 586 4 4 0 0 IS 587 8 8 0 0 IS 588 4 4 0 0 IS 589 3 3 0 0 IS 590 4 4 0 0 IS 591 5 4 1 0 IS 592 8 8 0 0 IS 593 4 4 0 0 IS 594 4 3 1 0 IS 595 3 2 1 0 IS 596 5 4 1 0 IS 597 5 5 0 0 IS 598 3 3 0 0 IS 599 7 5 2 0 IS 600 4 4 0 0 IS 601 3 2 1 0 IS 602 5 5 0 0 IS 603 6 6 0 0 IS 604 0 0 0 0 IS 605 4 4 0 0 IS 606 7 6 1 0 IS 607 9 9 0 0 IS 608 5 5 0 0 IS 609 6 5 0 1 IS 610 6 5 0 1 IS 611 6 6 0 0 IS 612 2 2 0 0 IS 613 6 6 0 0 IS 614 5 5 0 0 IS 615 10 10 0 0 IS 616 9 9 0 0 IS 617 4 3 1 0 IS 618 4 4 0 0 IS 619 7 7 0 0 IS 620 3 3 0 0 IS 621 1 1 0 0 IS 622 4 4 0 0 IS 623 3 3 0 0 IS 624 3 3 0 0 IS 625 7 6 1 0 IS 626 6 5 1 0 IS 627 1 1 0 0 IS 628 6 5 1 0 IS 629 2 2 0 0 IS 630 4 3 1 0 IS 631 2 1 1 0 IS 632 4 4 0 0 IS 633 4 4 0 0 IS 634 3 3 0 0 IS 635 4 3 1 0 IS 636 2 2 0 0 IS 637 4 3 1 0 IS 638 5 2 3 0 IS 639 3 3 0 0 IS 640 1 0 1 0 IS 641 1 1 0 0 IS 642 5 5 0 0 IS 643 2 2 0 0 IS 644 2 2 0 0 IS 645 4 2 2 0 IS 646 1 1 0 0 IS 647 3 2 1 0 IS 648 6 5 1 0 IS 649 4 2 2 0 IS 650 4 4 0 0 IS 651 3 2 1 0 IS 652 4 4 0 0 IS 653 2 2 0 0 IS 654 1 1 0 0 IS 655 0 0 0 0 IS 656 2 1 1 0 IS 657 5 4 1 0 IS 658 2 2 0 0 IS 659 4 4 0 0 IS 660 4 4 0 0 IS 661 2 2 0 0 IS 662 2 2 0 0 IS 663 2 2 0 0 IS 664 1 0 1 0 IS 665 2 1 1 0 IS 666 0 0 0 0 IS 667 1 1 0 0 IS 668 0 0 0 0 IS 669 2 2 0 0 IS 670 0 0 0 0 IS 671 2 2 0 0 IS 672 4 4 0 0 IS 673 1 1 0 0 IS 674 1 1 0 0 IS 675 0 0 0 0 IS 676 2 0 2 0 IS 677 2 2 0 0 IS 678 3 3 0 0 IS 679 3 3 0 0 IS 680 1 1 0 0 IS 681 2 1 1 0 IS 682 1 0 1 0 IS 683 0 0 0 0 IS 684 2 2 0 0 IS 685 4 3 1 0 IS 686 1 1 0 0 IS 687 0 0 0 0 IS 688 0 0 0 0 IS 689 1 1 0 0 IS 690 2 2 0 0 IS 691 3 2 1 0 IS 692 7 5 2 0 IS 693 1 1 0 0 IS 694 0 0 0 0 IS 695 4 3 1 0 IS 696 7 5 2 0 IS 697 2 1 1 0 IS 698 1 0 1 0 IS 699 3 1 2 0 IS 700 0 0 0 0 IS 701 0 0 0 0 IS 702 3 2 1 0 IS 703 2 2 0 0 IS 704 2 2 0 0 IS 705 3 2 1 0 IS 706 3 1 2 0 IS 707 2 1 1 0 IS 708 2 0 2 0 IS 709 0 0 0 0 IS 710 3 3 0 0 IS 711 3 2 1 0 IS 712 1 1 0 0 IS 713 4 3 1 0 IS 714 2 2 0 0 IS 715 4 2 2 0 IS 716 1 1 0 0 IS 717 1 0 1 0 IS 718 1 1 0 0 IS 719 2 2 0 0 IS 720 1 1 0 0 IS 721 2 2 0 0 IS 722 2 2 0 0 IS 723 0 0 0 0 IS 724 3 2 1 0 IS 725 2 1 1 0 IS 726 4 4 0 0 IS 727 2 1 1 0 IS 728 0 0 0 0 IS 729 2 2 0 0 IS 730 0 0 0 0 IS 731 2 2 0 0 IS 732 3 2 1 0 IS 733 0 0 0 0 IS 734 2 2 0 0 IS 735 2 1 1 0 IS 736 5 5 0 0 IS 737 5 4 1 0 IS 738 1 1 0 0 IS 739 3 2 1 0 IS 740 1 1 0 0 IS 741 2 2 0 0 IS 742 1 0 1 0 IS 743 0 0 0 0 IS 744 2 2 0 0 IS 745 3 3 0 0 IS 746 0 0 0 0 IS 747 2 2 0 0 IS 748 2 2 0 0 IS 749 1 1 0 0 IS 750 3 3 0 0 IS 751 6 5 1 0 IS 752 2 2 0 0 IS 753 0 0 0 0 IS 754 0 0 0 0 IS 755 1 0 1 0 IS 756 1 1 0 0 IS 757 0 0 0 0 IS 758 2 2 0 0 IS 759 0 0 0 0 IS 760 0 0 0 0 IS 761 1 1 0 0 IS 762 1 1 0 0 IS 763 0 0 0 0 IS 764 2 2 0 0 IS 765 2 1 1 0 IS 766 2 1 1 0 IS 767 4 3 0 1 IS 768 0 0 0 0 IS 769 4 4 0 0 IS 770 1 1 0 0 IS 771 0 0 0 0 IS 772 2 0 2 0 IS 773 1 1 0 0 IS 774 3 3 0 0 IS 775 1 0 1 0 IS 776 3 1 2 0 IS 777 1 0 1 0 IS 778 1 1 0 0 IS 779 2 2 0 0 IS 780 1 1 0 0 IS 781 3 1 2 0 IS 782 2 0 2 0 IS 783 3 3 0 0 IS 784 1 0 0 1 IS 785 2 1 0 1 IS 786 1 1 0 0 IS 787 1 1 0 0 IS 788 0 0 0 0 IS 789 2 1 1 0 IS 790 1 1 0 0 IS 791 3 3 0 0 IS 792 1 0 1 0 IS 793 1 0 1 0 IS 794 3 2 1 0 IS 795 1 1 0 0 IS 796 4 3 1 0 IS 797 0 0 0 0 IS 798 5 4 1 0 IS 799 1 0 1 0 IS 800 4 2 2 0 IS 801 0 0 0 0 IS 802 1 0 1 0 IS 803 0 0 0 0 IS 804 0 0 0 0 IS 805 0 0 0 0 IS 806 1 1 0 0 IS 807 3 1 2 0 IS 808 1 0 1 0 IS 809 0 0 0 0 IS 810 2 1 1 0 IS 811 1 1 0 0 IS 812 3 1 2 0 IS 813 0 0 0 0 IS 814 1 0 1 0 IS 815 0 0 0 0 IS 816 4 2 2 0 IS 817 2 2 0 0 IS 818 1 1 0 0 IS 819 1 0 1 0 IS 820 0 0 0 0 IS 821 1 0 1 0 IS 822 0 0 0 0 IS 823 1 1 0 0 IS 824 2 0 2 0 IS 825 0 0 0 0 IS 826 3 3 0 0 IS 827 1 1 0 0 IS 828 1 0 1 0 IS 829 2 1 1 0 IS 830 4 2 2 0 IS 831 0 0 0 0 IS 832 1 1 0 0 IS 833 1 1 0 0 IS 834 1 1 0 0 IS 835 0 0 0 0 IS 836 1 1 0 0 IS 837 1 1 0 0 IS 838 2 1 1 0 IS 839 2 1 1 0 IS 840 1 0 1 0 IS 841 0 0 0 0 IS 842 1 1 0 0 IS 843 1 0 1 0 IS 844 0 0 0 0 IS 845 1 1 0 0 IS 846 1 0 1 0 IS 847 0 0 0 0 IS 848 1 1 0 0 IS 849 0 0 0 0 IS 850 1 1 0 0 IS 851 0 0 0 0 IS 852 2 2 0 0 IS 853 1 1 0 0 IS 854 2 1 1 0 IS 855 4 1 3 0 IS 856 1 0 1 0 IS 857 1 0 1 0 IS 858 1 1 0 0 IS 859 1 0 1 0 IS 860 0 0 0 0 IS 861 0 0 0 0 IS 862 0 0 0 0 IS 863 1 1 0 0 IS 864 0 0 0 0 IS 865 0 0 0 0 IS 866 1 1 0 0 IS 867 0 0 0 0 IS 868 5 3 2 0 IS 869 1 1 0 0 IS 870 3 3 0 0 IS 871 0 0 0 0 IS 872 2 2 0 0 IS 873 2 1 0 1 IS 874 0 0 0 0 IS 875 0 0 0 0 IS 876 0 0 0 0 IS 877 2 1 1 0 IS 878 2 1 1 0 IS 879 2 1 1 0 IS 880 2 2 0 0 IS 881 2 2 0 0 IS 882 2 2 0 0 IS 883 0 0 0 0 IS 884 3 1 2 0 IS 885 2 2 0 0 IS 886 2 1 1 0 IS 887 2 0 2 0 IS 888 4 1 3 0 IS 889 1 1 0 0 IS 890 1 0 1 0 IS 891 2 2 0 0 IS 892 0 0 0 0 IS 893 0 0 0 0 IS 894 3 2 1 0 IS 895 2 1 1 0 IS 896 1 1 0 0 IS 897 1 1 0 0 IS 898 2 2 0 0 IS 899 0 0 0 0 IS 900 1 1 0 0 IS 901 0 0 0 0 IS 902 1 1 0 0 IS 903 2 1 1 0 IS 904 0 0 0 0 IS 905 3 3 0 0 IS 906 2 1 1 0 IS 907 3 2 1 0 IS 908 1 1 0 0 IS 909 1 0 1 0 IS 910 1 0 1 0 IS 911 4 2 2 0 IS 912 1 0 1 0 IS 913 3 3 0 0 IS 914 1 1 0 0 IS 915 0 0 0 0 IS 916 1 1 0 0 IS 917 2 2 0 0 IS 918 0 0 0 0 IS 919 2 1 0 1 IS 920 2 2 0 0 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count RL 100 4000000 # Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count FRL 100 2000000 # Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count LRL 100 2000000 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions ID 1 25661 34737 ID 2 9703 13020 ID 3 9158 10460 ID 4 3621 4690 ID 5 1381 1520 ID 6 3739 5271 ID 7 552 686 ID 8 876 1770 ID 9 1440 2372 ID 10 394 1026 ID 11 167 362 ID 12 898 2359 ID 13 51 106 ID 14 122 711 ID 15 288 711 ID 16 84 382 ID 17 14 51 ID 18 224 878 ID 19 7 36 ID 20 18 215 ID 21 32 334 ID 22 9 87 ID 23 2 9 ID 24 17 212 ID 25 0 33 ID 26 0 39 ID 27 2 41 ID 28 1 39 ID 29 0 7 ID 30 0 37 ID 32 0 8 ID 33 0 13 ID 34 0 3 ID 36 0 5 ID 38 0 1 ID 39 0 1 ID 41 0 2 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev) IC 1 1 0 0 0 IC 2 0 0 2 0 IC 3 0 0 180 169 IC 4 153 139 181 208 IC 5 171 174 183 221 IC 6 177 168 206 230 IC 7 154 136 215 237 IC 8 171 167 269 252 IC 9 218 207 235 278 IC 10 191 199 282 314 IC 11 220 213 327 307 IC 12 225 197 264 305 IC 13 248 238 311 328 IC 14 262 229 310 306 IC 15 275 245 339 333 IC 16 279 287 315 360 IC 17 316 309 358 356 IC 18 304 312 407 374 IC 19 297 328 410 391 IC 20 328 337 376 411 IC 21 338 339 429 413 IC 22 333 333 436 466 IC 23 346 349 488 417 IC 24 362 362 472 432 IC 25 402 380 482 469 IC 26 410 350 452 513 IC 27 435 397 484 482 IC 28 389 400 544 520 IC 29 432 393 548 528 IC 30 435 398 622 525 IC 31 437 397 575 519 IC 32 476 427 538 520 IC 33 450 464 606 536 IC 34 398 438 572 567 IC 35 419 443 568 561 IC 36 442 403 614 573 IC 37 413 396 614 549 IC 38 431 420 621 584 IC 39 422 407 587 594 IC 40 467 458 632 540 IC 41 475 444 578 600 IC 42 437 424 591 617 IC 43 434 395 568 532 IC 44 461 440 581 527 IC 45 431 439 571 538 IC 46 413 419 637 522 IC 47 391 418 563 548 IC 48 413 400 587 565 IC 49 445 412 606 555 IC 50 419 428 557 489 IC 51 436 410 619 565 IC 52 425 402 572 535 IC 53 410 369 583 529 IC 54 414 374 599 538 IC 55 375 375 607 518 IC 56 390 382 557 499 IC 57 394 399 610 482 IC 58 420 397 548 491 IC 59 399 358 570 534 IC 60 394 384 594 505 IC 61 393 368 545 494 IC 62 361 352 550 534 IC 63 380 355 530 521 IC 64 374 348 510 551 IC 65 347 329 499 471 IC 66 343 331 507 477 IC 67 359 316 530 472 IC 68 336 295 502 457 IC 69 347 307 496 476 IC 70 303 307 527 469 IC 71 303 288 482 439 IC 72 314 326 447 458 IC 73 306 304 441 467 IC 74 288 282 464 399 IC 75 283 235 399 400 IC 76 245 268 418 400 IC 77 306 262 410 397 IC 78 258 233 378 372 IC 79 274 224 393 389 IC 80 268 249 369 359 IC 81 235 232 386 393 IC 82 209 220 346 371 IC 83 212 224 368 318 IC 84 209 213 333 323 IC 85 225 185 315 333 IC 86 188 191 295 323 IC 87 185 174 278 318 IC 88 174 144 270 286 IC 89 143 156 288 294 IC 90 168 168 272 249 IC 91 129 160 244 241 IC 92 137 121 256 241 IC 93 114 111 210 208 IC 94 86 98 241 213 IC 95 102 120 234 268 IC 96 112 115 254 279 IC 97 166 157 215 243 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part. COV [1-1] 1 1585339 COV [2-2] 2 1435106 COV [3-3] 3 1295724 COV [4-4] 4 1168700 COV [5-5] 5 1071345 COV [6-6] 6 985089 COV [7-7] 7 930621 COV [8-8] 8 899823 COV [9-9] 9 885905 COV [10-10] 10 885036 COV [11-11] 11 880098 COV [12-12] 12 877227 COV [13-13] 13 865929 COV [14-14] 14 845396 COV [15-15] 15 817377 COV [16-16] 16 778350 COV [17-17] 17 725507 COV [18-18] 18 662635 COV [19-19] 19 594587 COV [20-20] 20 524636 COV [21-21] 21 448484 COV [22-22] 22 382366 COV [23-23] 23 318304 COV [24-24] 24 261710 COV [25-25] 25 210941 COV [26-26] 26 171141 COV [27-27] 27 134660 COV [28-28] 28 105963 COV [29-29] 29 83899 COV [30-30] 30 65751 COV [31-31] 31 52204 COV [32-32] 32 41583 COV [33-33] 33 34401 COV [34-34] 34 29094 COV [35-35] 35 25339 COV [36-36] 36 21920 COV [37-37] 37 19223 COV [38-38] 38 17738 COV [39-39] 39 16546 COV [40-40] 40 14368 COV [41-41] 41 13512 COV [42-42] 42 12819 COV [43-43] 43 11816 COV [44-44] 44 11182 COV [45-45] 45 10545 COV [46-46] 46 10133 COV [47-47] 47 9931 COV [48-48] 48 9609 COV [49-49] 49 9072 COV [50-50] 50 8567 COV [51-51] 51 8269 COV [52-52] 52 7874 COV [53-53] 53 7741 COV [54-54] 54 7140 COV [55-55] 55 6911 COV [56-56] 56 6732 COV [57-57] 57 6539 COV [58-58] 58 6106 COV [59-59] 59 5717 COV [60-60] 60 5581 COV [61-61] 61 5481 COV [62-62] 62 5322 COV [63-63] 63 5020 COV [64-64] 64 4689 COV [65-65] 65 4609 COV [66-66] 66 4538 COV [67-67] 67 4313 COV [68-68] 68 4121 COV [69-69] 69 3994 COV [70-70] 70 3884 COV [71-71] 71 3699 COV [72-72] 72 3451 COV [73-73] 73 3509 COV [74-74] 74 3482 COV [75-75] 75 3289 COV [76-76] 76 3028 COV [77-77] 77 3101 COV [78-78] 78 2946 COV [79-79] 79 2717 COV [80-80] 80 2614 COV [81-81] 81 2416 COV [82-82] 82 2266 COV [83-83] 83 2197 COV [84-84] 84 2053 COV [85-85] 85 2054 COV [86-86] 86 2024 COV [87-87] 87 2030 COV [88-88] 88 1815 COV [89-89] 89 1960 COV [90-90] 90 1886 COV [91-91] 91 1648 COV [92-92] 92 1655 COV [93-93] 93 1542 COV [94-94] 94 1485 COV [95-95] 95 1465 COV [96-96] 96 1407 COV [97-97] 97 1267 COV [98-98] 98 1250 COV [99-99] 99 1268 COV [100-100] 100 1184 COV [101-101] 101 1079 COV [102-102] 102 1076 COV [103-103] 103 1124 COV [104-104] 104 1051 COV [105-105] 105 954 COV [106-106] 106 918 COV [107-107] 107 847 COV [108-108] 108 808 COV [109-109] 109 777 COV [110-110] 110 731 COV [111-111] 111 796 COV [112-112] 112 698 COV [113-113] 113 716 COV [114-114] 114 651 COV [115-115] 115 640 COV [116-116] 116 644 COV [117-117] 117 553 COV [118-118] 118 495 COV [119-119] 119 467 COV [120-120] 120 504 COV [121-121] 121 504 COV [122-122] 122 454 COV [123-123] 123 462 COV [124-124] 124 457 COV [125-125] 125 432 COV [126-126] 126 372 COV [127-127] 127 380 COV [128-128] 128 426 COV [129-129] 129 374 COV [130-130] 130 355 COV [131-131] 131 343 COV [132-132] 132 334 COV [133-133] 133 317 COV [134-134] 134 311 COV [135-135] 135 284 COV [136-136] 136 278 COV [137-137] 137 266 COV [138-138] 138 254 COV [139-139] 139 247 COV [140-140] 140 229 COV [141-141] 141 235 COV [142-142] 142 224 COV [143-143] 143 255 COV [144-144] 144 189 COV [145-145] 145 197 COV [146-146] 146 193 COV [147-147] 147 201 COV [148-148] 148 171 COV [149-149] 149 161 COV [150-150] 150 169 COV [151-151] 151 136 COV [152-152] 152 152 COV [153-153] 153 139 COV [154-154] 154 153 COV [155-155] 155 121 COV [156-156] 156 125 COV [157-157] 157 112 COV [158-158] 158 94 COV [159-159] 159 100 COV [160-160] 160 80 COV [161-161] 161 84 COV [162-162] 162 72 COV [163-163] 163 78 COV [164-164] 164 90 COV [165-165] 165 74 COV [166-166] 166 83 COV [167-167] 167 80 COV [168-168] 168 69 COV [169-169] 169 67 COV [170-170] 170 75 COV [171-171] 171 72 COV [172-172] 172 70 COV [173-173] 173 61 COV [174-174] 174 69 COV [175-175] 175 72 COV [176-176] 176 53 COV [177-177] 177 70 COV [178-178] 178 62 COV [179-179] 179 60 COV [180-180] 180 71 COV [181-181] 181 61 COV [182-182] 182 67 COV [183-183] 183 74 COV [184-184] 184 74 COV [185-185] 185 76 COV [186-186] 186 55 COV [187-187] 187 60 COV [188-188] 188 36 COV [189-189] 189 49 COV [190-190] 190 51 COV [191-191] 191 58 COV [192-192] 192 54 COV [193-193] 193 57 COV [194-194] 194 50 COV [195-195] 195 53 COV [196-196] 196 48 COV [197-197] 197 58 COV [198-198] 198 33 COV [199-199] 199 34 COV [200-200] 200 31 COV [201-201] 201 26 COV [202-202] 202 36 COV [203-203] 203 43 COV [204-204] 204 31 COV [205-205] 205 26 COV [206-206] 206 47 COV [207-207] 207 30 COV [208-208] 208 40 COV [209-209] 209 27 COV [210-210] 210 25 COV [211-211] 211 29 COV [212-212] 212 20 COV [213-213] 213 30 COV [214-214] 214 30 COV [215-215] 215 32 COV [216-216] 216 33 COV [217-217] 217 21 COV [218-218] 218 29 COV [219-219] 219 18 COV [220-220] 220 34 COV [221-221] 221 29 COV [222-222] 222 21 COV [223-223] 223 18 COV [224-224] 224 15 COV [225-225] 225 15 COV [226-226] 226 14 COV [227-227] 227 20 COV [228-228] 228 14 COV [229-229] 229 12 COV [230-230] 230 17 COV [231-231] 231 8 COV [232-232] 232 14 COV [233-233] 233 13 COV [234-234] 234 16 COV [235-235] 235 12 COV [236-236] 236 10 COV [237-237] 237 8 COV [238-238] 238 10 COV [239-239] 239 10 COV [240-240] 240 7 COV [241-241] 241 5 COV [242-242] 242 7 COV [243-243] 243 9 COV [244-244] 244 20 COV [245-245] 245 12 COV [246-246] 246 9 COV [247-247] 247 7 COV [248-248] 248 16 COV [249-249] 249 12 COV [250-250] 250 22 COV [251-251] 251 16 COV [252-252] 252 10 COV [253-253] 253 11 COV [254-254] 254 10 COV [255-255] 255 10 COV [256-256] 256 9 COV [257-257] 257 3 COV [258-258] 258 6 COV [259-259] 259 2 COV [260-260] 260 11 COV [261-261] 261 9 COV [262-262] 262 2 COV [263-263] 263 4 COV [264-264] 264 3 COV [265-265] 265 3 COV [267-267] 267 1 COV [268-268] 268 2 COV [269-269] 269 1 COV [270-270] 270 4 COV [271-271] 271 3 COV [272-272] 272 3 COV [273-273] 273 3 COV [274-274] 274 2 COV [275-275] 275 2 COV [277-277] 277 1 COV [283-283] 283 2 COV [284-284] 284 1 COV [288-288] 288 1 COV [289-289] 289 3 COV [295-295] 295 1 COV [296-296] 296 1 COV [299-299] 299 1 COV [302-302] 302 1 COV [305-305] 305 1 COV [308-308] 308 1 COV [314-314] 314 1 COV [321-321] 321 1 COV [323-323] 323 1 COV [329-329] 329 1 COV [334-334] 334 1 COV [338-338] 338 1 COV [339-339] 339 1 COV [347-347] 347 1 COV [348-348] 348 1 COV [350-350] 350 1 COV [354-354] 354 1 COV [362-362] 362 2 COV [365-365] 365 1 COV [367-367] 367 1 COV [371-371] 371 1 COV [372-372] 372 1 COV [380-380] 380 2 COV [382-382] 382 1 COV [383-383] 383 1 COV [384-384] 384 1 COV [385-385] 385 6 COV [386-386] 386 14 COV [387-387] 387 1 COV [401-401] 401 2 COV [414-414] 414 1 COV [421-421] 421 1 COV [422-422] 422 1 COV [440-440] 440 1 COV [448-448] 448 1 COV [454-454] 454 1 COV [465-465] 465 1 COV [466-466] 466 1 COV [476-476] 476 1 COV [480-480] 480 1 COV [485-485] 485 1 COV [492-492] 492 1 COV [501-501] 501 1 COV [505-505] 505 1 COV [510-510] 510 1 COV [519-519] 519 1 COV [521-521] 521 1 COV [529-529] 529 1 COV [530-530] 530 1 COV [535-535] 535 1 COV [539-539] 539 1 COV [541-541] 541 1 COV [553-553] 553 1 COV [557-557] 557 1 COV [560-560] 560 1 COV [561-561] 561 1 COV [563-563] 563 1 COV [572-572] 572 3 COV [580-580] 580 1 COV [582-582] 582 1 COV [584-584] 584 1 COV [591-591] 591 1 COV [593-593] 593 1 COV [597-597] 597 1 COV [598-598] 598 1 COV [599-599] 599 1 COV [601-601] 601 1 COV [606-606] 606 1 COV [607-607] 607 1 COV [608-608] 608 3 COV [609-609] 609 1 COV [610-610] 610 1 COV [611-611] 611 2 COV [616-616] 616 1 COV [618-618] 618 2 COV [624-624] 624 1 COV [625-625] 625 1 COV [631-631] 631 2 COV [633-633] 633 1 COV [635-635] 635 1 COV [640-640] 640 3 COV [642-642] 642 1 COV [643-643] 643 1 COV [645-645] 645 1 COV [646-646] 646 1 COV [647-647] 647 1 COV [648-648] 648 1 COV [649-649] 649 1 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile GCD 0.0 0.170 0.000 0.000 0.000 0.000 0.000 GCD 17.0 0.340 2.880 2.880 10.047 17.215 17.215 GCD 18.0 0.596 7.040 7.040 8.980 13.665 13.665 GCD 19.0 2.213 5.415 6.345 7.520 8.810 9.595 GCD 20.0 14.043 6.730 8.165 9.215 10.385 11.505 GCD 21.0 37.872 7.630 8.530 9.627 10.890 12.147 GCD 22.0 64.426 7.979 8.766 10.038 11.414 12.503 GCD 23.0 80.340 8.619 9.455 10.630 12.140 13.416 GCD 24.0 87.149 8.559 9.653 11.075 12.712 14.077 GCD 25.0 90.298 9.298 11.270 12.245 13.807 16.544 GCD 26.0 91.745 9.559 10.620 13.730 16.930 25.413 GCD 27.0 93.277 11.325 13.342 16.810 39.970 40.804 GCD 28.0 94.723 14.252 18.647 21.780 36.690 41.097 GCD 29.0 97.106 11.811 16.128 28.785 39.479 43.686 GCD 30.0 98.213 12.610 16.272 21.655 25.855 37.597 GCD 31.0 99.149 3.659 18.620 21.530 25.005 27.696 GCD 32.0 99.404 8.780 8.780 15.065 21.645 21.645 GCD 33.0 99.574 4.085 4.085 7.875 11.665 11.665 GCD 34.0 99.660 13.425 13.425 13.425 13.425 13.425 GCD 35.0 99.745 26.325 26.325 26.325 26.325 26.325 GCD 43.0 99.830 11.965 11.965 11.965 11.965 11.965 GCD 44.0 99.915 0.040 0.040 0.040 0.040 0.040 GCD 46.0 100.000 0.810 0.810 0.810 0.810 0.810