# This file was produced by samtools stats (1.10+htslib-1.10) and can be plotted using plot-bamstats # This file contains statistics for all reads. # The command line was: stats --reference data/reference/Pf3D7_v3.fa.gz results/aligned/QG0088-C.bam # CHK, Checksum [2]Read Names [3]Sequences [4]Qualities # CHK, CRC32 of reads which passed filtering followed by addition (32bit overflow) CHK a591def2 ba141233 ee918e05 # Summary Numbers. Use `grep ^SN | cut -f 2-` to extract this part. SN raw total sequences: 4000000 SN filtered sequences: 0 SN sequences: 4000000 SN is sorted: 1 SN 1st fragments: 2000000 SN last fragments: 2000000 SN reads mapped: 2082705 SN reads mapped and paired: 2072704 # paired-end technology bit set + both mates mapped SN reads unmapped: 1917295 SN reads properly paired: 1944424 # proper-pair bit set SN reads paired: 4000000 # paired-end technology bit set SN reads duplicated: 4254 # PCR or optical duplicate bit set SN reads MQ0: 101861 # mapped and MQ=0 SN reads QC failed: 0 SN non-primary alignments: 0 SN total length: 400000000 # ignores clipping SN total first fragment length: 200000000 # ignores clipping SN total last fragment length: 200000000 # ignores clipping SN bases mapped: 208270500 # ignores clipping SN bases mapped (cigar): 203455474 # more accurate SN bases trimmed: 0 SN bases duplicated: 425400 SN mismatches: 1755230 # from NM fields SN error rate: 8.627096e-03 # mismatches / bases mapped (cigar) SN average length: 100 SN average first fragment length: 100 SN average last fragment length: 100 SN maximum length: 100 SN maximum first fragment length: 100 SN maximum last fragment length: 100 SN average quality: 35.0 SN insert size average: 241.3 SN insert size standard deviation: 68.7 SN inward oriented pairs: 976141 SN outward oriented pairs: 3958 SN pairs with other orientation: 3097 SN pairs on different chromosomes: 55403 SN percentage of properly paired reads (%): 48.6 # First Fragment Qualities. Use `grep ^FFQ | cut -f 2-` to extract this part. # Columns correspond to qualities and rows to cycles. First column is the cycle number. FFQ 1 1148 286 449 174 121 0 0 0 391 0 782 1380 0 0 0 7180 1111 821 5826 1789 2172 8092 0 1071 1434 1913 11738 79290 66138 0 0 1794858 0 11836 0 0 0 0 0 0 0 0 0 0 0 FFQ 2 195 0 4 0 0 0 0 0 0 0 0 0 0 0 0 469 0 0 0 0 0 0 12045 0 0 2342 0 0 132708 0 403447 1159894 288896 0 0 0 0 0 0 0 0 0 0 0 0 FFQ 3 0 12 0 0 0 0 0 0 0 0 0 0 0 0 1618 363 0 0 320 0 1802 2071 2082 4779 1434 18611 3332 55436 9396 0 0 280083 0 0 1618661 0 0 0 0 0 0 0 0 0 0 FFQ 4 817 78 482 0 0 313 0 869 0 0 0 0 1392 0 1951 1597 727 3763 8902 1034 1267 2196 11800 1277 4566 0 2255 0 74356 6183 0 0 203888 163873 622944 347422 536048 0 0 0 0 0 0 0 0 FFQ 5 0 0 0 0 0 0 0 0 0 474 0 0 0 0 0 0 0 0 0 13535 0 0 0 0 0 0 0 0 0 0 102895 0 0 0 0 0 1883096 0 0 0 0 0 0 0 0 FFQ 6 244 617 385 43 682 0 0 674 1516 0 0 855 0 0 2509 10392 461 1817 1110 6812 505 2899 2051 0 0 0 6630 0 15814 37592 0 0 0 0 16460 0 1889932 0 0 0 0 0 0 0 0 FFQ 7 0 0 42 391 159 0 330 0 0 870 0 0 0 851 0 0 0 4900 11016 0 732 3590 7665 2553 3183 0 0 3120 0 18586 75260 0 0 147502 0 979772 671282 0 68196 0 0 0 0 0 0 FFQ 8 0 222 139 253 0 0 0 93 335 541 1034 0 681 378 0 1654 5148 11938 761 4109 5078 5164 3671 0 2008 1880 15356 0 74895 0 0 9340 10553 0 466011 146593 604242 627923 0 0 0 0 0 0 0 FFQ 9 1 0 316 117 0 0 727 0 0 0 981 1553 2005 0 0 0 1989 5395 2282 3540 1850 8132 0 5645 0 35125 0 0 0 0 0 10984 195534 0 0 0 1723824 0 0 0 0 0 0 0 0 FFQ 10 13 92 416 154 0 0 337 0 1214 0 806 0 0 1988 466 6735 878 3156 13558 1657 2071 6010 1911 1259 16806 0 0 0 0 76906 0 8909 10721 0 0 0 1843937 0 0 0 0 0 0 0 0 FFQ 11 400 0 0 17 0 0 0 344 133 0 0 0 0 0 0 0 6761 0 0 0 0 0 0 0 0 0 0 58838 0 0 0 0 22088 0 0 0 1911419 0 0 0 0 0 0 0 0 FFQ 12 5 261 104 0 0 67 0 356 0 339 1693 0 560 0 0 2593 0 2783 1656 3049 3832 2154 36736 1204 6111 0 2398 0 14334 0 6578 19975 0 197513 0 475016 284041 892173 44469 0 0 0 0 0 0 FFQ 13 0 41 148 241 0 0 314 634 0 0 0 1337 0 0 1981 3997 885 14018 598 1665 3664 1316 922 10045 0 0 0 0 0 95946 0 0 0 14880 118302 173037 918379 637650 0 0 0 0 0 0 0 FFQ 14 1 125 230 0 0 0 463 0 0 667 0 0 0 0 0 4882 0 12809 0 0 0 0 3442 5060 0 2365 4747 0 0 0 99275 0 0 0 0 0 0 1865934 0 0 0 0 0 0 0 FFQ 15 4 255 213 0 84 0 546 13 507 448 1872 0 0 2146 0 1566 2456 0 788 2847 5506 4203 31269 0 3253 1941 2118 0 0 5319 14148 0 186451 0 18990 94871 820535 0 322577 475074 0 0 0 0 0 FFQ 16 0 44 236 0 0 0 343 0 0 0 0 0 1962 1415 0 497 0 888 897 1822 1562 0 0 32507 0 2015 0 0 0 0 0 0 0 205125 82601 393920 439903 156066 0 678197 0 0 0 0 0 FFQ 17 0 28 203 0 0 438 0 0 0 0 0 0 5556 0 617 0 0 0 1458 0 0 3091 0 1244 1391 0 0 0 69320 0 0 0 12240 0 460627 0 272974 197526 267366 0 564650 141271 0 0 0 FFQ 18 10 7 228 22 0 0 524 0 820 0 110 0 0 470 0 328 2518 1423 1728 13837 1893 0 0 0 0 0 14098 0 0 21252 0 0 0 103488 0 0 1837244 0 0 0 0 0 0 0 0 FFQ 19 0 167 121 0 0 787 0 0 0 813 0 1700 0 1090 573 0 0 762 5097 18205 0 5761 4089 0 1978 0 0 0 0 105480 0 0 19658 0 0 0 0 0 1833719 0 0 0 0 0 0 FFQ 20 18 0 11 0 0 51 0 0 93 0 1260 0 0 212 0 0 0 0 707 0 0 22923 4236 3422 0 0 7278 11094 0 0 7079 0 135244 12833 216014 460620 218683 0 0 898222 0 0 0 0 0 FFQ 21 0 7 0 0 0 0 0 0 708 0 0 0 0 0 114 0 0 16559 0 0 0 0 0 0 0 0 0 0 0 21118 92279 0 0 0 0 0 1869215 0 0 0 0 0 0 0 0 FFQ 22 0 7 0 18 0 0 0 52 0 0 82 0 96 2681 0 0 122 0 0 874 0 0 2710 1332 53301 0 0 0 0 0 0 16149 231027 13776 303199 429503 74331 0 0 870740 0 0 0 0 0 FFQ 23 0 0 81 207 0 5 0 0 0 1098 686 0 0 0 0 0 0 633 20042 0 0 0 3311 6749 0 0 0 0 0 113363 7883 0 0 93047 0 0 715637 257236 534834 245188 0 0 0 0 0 FFQ 24 355 0 0 19 21 0 0 0 0 959 0 0 0 0 0 0 0 0 13985 0 0 0 0 0 0 0 0 0 104380 0 0 0 0 0 0 0 1880281 0 0 0 0 0 0 0 0 FFQ 25 31 0 24 11 0 58 0 0 0 1057 0 0 0 0 0 0 0 0 18517 0 0 0 0 0 0 0 0 0 0 0 99828 0 23188 0 335047 268721 148049 232663 872806 0 0 0 0 0 0 FFQ 26 1016 18 161 0 183 446 0 1200 0 0 0 7366 0 0 2364 413 3616 0 1482 1418 565 0 0 24880 0 0 0 0 0 0 27394 64326 99200 0 18144 129406 21716 1594686 0 0 0 0 0 0 0 FFQ 27 17 0 0 57 0 0 0 1947 0 0 0 0 0 0 0 0 18325 0 0 0 0 0 0 0 0 0 0 0 0 92139 0 50635 0 24156 26633 68626 0 1717465 0 0 0 0 0 0 0 FFQ 28 22 52 0 0 0 60 103 0 158 2069 0 246 0 0 0 14761 776 0 0 0 1907 0 0 8089 3259 0 2321 0 78980 6050 0 19128 0 0 0 445762 217631 758354 440272 0 0 0 0 0 0 FFQ 29 17 79 0 10 93 0 0 1350 0 0 0 292 10848 0 0 0 0 0 0 0 0 0 0 0 0 52059 0 0 0 0 43018 22589 52097 11105 30269 19386 0 1718800 37988 0 0 0 0 0 0 FFQ 30 130 0 0 87 0 0 0 0 1568 0 0 0 0 11854 0 0 0 0 0 0 0 0 0 0 0 54183 0 0 0 0 0 0 0 0 0 0 1932178 0 0 0 0 0 0 0 0 FFQ 31 4 25 106 83 0 267 0 2150 0 0 0 0 0 15927 0 0 230 1067 907 982 0 764 0 0 0 0 63935 0 0 18833 0 38271 16613 13238 14907 0 0 0 1811691 0 0 0 0 0 0 FFQ 32 5 0 93 0 0 1813 0 0 0 0 0 10309 0 0 0 0 0 0 0 0 0 0 0 49514 0 0 0 0 0 0 51485 0 0 0 128779 382610 353899 350926 0 670567 0 0 0 0 0 FFQ 33 217 211 0 117 0 0 549 2658 0 0 0 0 0 0 16424 1589 0 0 0 0 1695 893 5089 0 1624 71769 2521 0 46464 0 0 0 0 0 47197 470441 0 106027 1224515 0 0 0 0 0 0 FFQ 34 36 0 0 0 122 0 0 2071 0 0 0 11348 0 0 0 0 0 0 0 0 0 0 0 0 52262 0 0 0 0 0 0 0 0 112971 0 53610 402964 720690 0 330601 0 313325 0 0 0 FFQ 35 3 309 0 0 185 0 0 677 3709 0 0 686 0 0 3504 677 25562 303 768 1251 597 0 0 17922 0 0 0 0 109413 0 0 110118 68088 0 0 463265 455518 737445 0 0 0 0 0 0 0 FFQ 36 106 44 0 0 119 0 478 0 0 7371 0 0 0 0 0 523 224 0 0 483 1617 43816 0 0 1418 0 0 0 0 0 218581 20803 0 0 416741 151014 40492 0 69273 1026897 0 0 0 0 0 FFQ 37 36 0 0 0 0 0 0 0 3998 251 0 0 0 0 0 23142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 103249 0 0 0 0 0 0 1869324 0 0 0 0 0 0 0 FFQ 38 51 0 0 186 0 0 0 0 3414 0 0 0 0 20062 0 0 0 0 0 0 0 0 0 0 0 0 77751 0 0 0 0 0 99297 165821 20258 198458 631645 423998 359059 0 0 0 0 0 0 FFQ 39 180 0 0 295 0 0 0 0 4090 0 0 0 0 0 0 25977 0 0 0 0 0 0 0 0 0 0 0 0 0 105759 0 0 0 221049 0 0 476864 503789 661997 0 0 0 0 0 0 FFQ 40 192 25 271 239 0 0 531 3415 942 0 0 0 1471 18385 656 0 2922 0 2039 3601 0 6140 1923 1504 1540 70724 2785 0 0 17592 0 65793 0 131314 0 303953 552577 0 809466 0 0 0 0 0 0 FFQ 41 35 0 262 0 0 0 0 2993 0 0 0 13232 0 0 0 0 0 0 0 0 0 0 0 54760 0 0 0 0 0 0 0 0 71999 0 154734 433004 523792 745189 0 0 0 0 0 0 0 FFQ 42 407 0 0 354 0 0 0 0 4759 0 0 0 0 0 23953 0 0 0 0 0 0 0 0 0 0 0 0 0 99823 0 0 0 0 125787 430725 178602 616127 0 319660 0 199803 0 0 0 0 FFQ 43 384 0 0 381 0 0 0 0 4007 0 0 0 0 20974 0 0 0 0 0 0 0 0 0 0 0 0 0 89959 0 0 0 0 0 0 0 0 0 1884295 0 0 0 0 0 0 0 FFQ 44 383 52 325 0 0 0 0 4349 0 0 0 0 18093 2286 0 0 0 934 1179 0 1765 1708 0 4213 0 66210 2341 7300 0 0 61731 0 44510 0 235817 152355 413586 0 980863 0 0 0 0 0 0 FFQ 45 26 0 0 278 0 0 0 4297 0 0 0 0 0 22042 0 0 0 0 0 0 0 0 0 0 0 0 77062 0 0 0 0 0 51101 0 154418 261638 347555 92932 988651 0 0 0 0 0 0 FFQ 46 0 3 0 389 41 0 0 3728 0 245 0 0 18642 0 0 0 1114 0 0 0 696 0 1161 4442 69192 0 2468 0 3503 0 8149 0 153050 0 120176 490163 152793 91991 0 878054 0 0 0 0 0 FFQ 47 0 0 0 0 0 0 0 4168 0 0 0 0 20219 0 0 0 0 0 0 0 0 0 0 0 0 70833 0 0 0 0 0 0 235509 0 0 0 920933 335185 0 413153 0 0 0 0 0 FFQ 48 0 0 0 310 0 0 0 5099 0 0 0 0 0 24410 0 0 0 0 0 0 0 0 0 0 0 0 83138 0 0 0 0 54393 0 0 441802 73930 0 136983 1179935 0 0 0 0 0 0 FFQ 49 75 0 0 455 0 0 0 0 5022 0 0 0 0 25170 0 0 0 0 0 0 0 0 0 0 0 0 100707 0 0 0 0 0 0 85822 0 625442 177761 284533 373119 321894 0 0 0 0 0 FFQ 50 145 18 0 803 760 0 0 5446 0 0 1199 0 0 0 24099 615 1044 416 1939 2544 3883 708 2071 2793 0 0 0 3291 95352 0 0 7983 0 152785 95914 0 246736 711365 493554 144537 0 0 0 0 0 FFQ 51 160 0 573 0 0 0 0 4605 0 236 0 0 0 21383 0 721 310 0 826 501 1782 0 985 0 1510 85932 0 0 0 0 0 16309 0 0 96398 118747 806564 402018 93564 346876 0 0 0 0 0 FFQ 52 435 0 0 0 0 576 0 6081 0 0 0 0 0 26319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99704 0 37251 0 0 71899 60703 207831 136313 1352888 0 0 0 0 0 0 0 FFQ 53 504 30 77 0 577 0 0 0 0 6467 0 0 0 0 26281 0 0 0 0 0 0 0 0 0 0 0 0 0 99523 0 0 0 82669 0 0 488091 172702 316000 302924 306554 197601 0 0 0 0 FFQ 54 0 0 0 0 0 0 601 0 6409 0 0 0 0 0 26926 0 0 0 0 0 0 0 0 0 0 0 0 120704 0 0 0 26717 17947 24392 29243 0 21793 1725268 0 0 0 0 0 0 0 FFQ 55 4 0 0 0 395 0 0 5359 0 0 0 0 0 23811 0 0 0 0 0 0 0 0 0 0 75615 0 0 0 0 0 0 49537 88659 228283 0 200399 235250 162319 930369 0 0 0 0 0 0 FFQ 56 23 0 0 680 0 0 0 6728 0 0 0 0 0 0 33357 0 0 0 0 0 0 0 0 0 0 0 0 115977 0 0 0 0 0 137344 94347 193334 273543 335155 809512 0 0 0 0 0 0 FFQ 57 133 0 0 0 628 0 0 0 5558 0 0 0 25025 0 0 0 0 0 0 0 0 0 0 0 93917 0 0 0 0 0 0 0 0 0 0 0 1874739 0 0 0 0 0 0 0 0 FFQ 58 122 0 0 0 700 0 0 0 7259 0 0 0 0 0 0 0 42787 0 0 0 0 0 0 0 0 0 0 0 0 135293 27813 47400 0 0 48839 184473 1505314 0 0 0 0 0 0 0 0 FFQ 59 156 0 0 153 0 695 0 5911 0 302 0 0 0 26241 0 215 0 0 0 960 0 0 4301 1014 0 0 96861 0 0 0 0 0 0 0 13734 0 1849457 0 0 0 0 0 0 0 0 FFQ 60 61 0 0 533 0 0 0 6431 0 0 0 0 0 26657 0 0 0 0 0 0 0 0 0 0 0 0 81968 0 0 0 53742 0 0 181836 0 0 123917 1422784 102071 0 0 0 0 0 0 FFQ 61 20 0 0 761 0 0 0 0 7590 0 0 0 0 0 31476 0 0 0 0 0 0 0 0 0 0 0 0 110655 0 0 0 0 0 94430 170526 167617 0 428192 988733 0 0 0 0 0 0 FFQ 62 32 0 0 0 91 768 0 8098 0 312 0 0 0 158 32084 0 222 1010 0 514 520 0 0 0 0 0 111841 0 0 0 0 0 17954 0 131655 276600 494365 294257 629519 0 0 0 0 0 0 FFQ 63 0 0 0 0 0 0 6111 0 0 0 0 20583 0 0 0 0 0 0 0 0 0 0 68282 0 0 0 0 0 0 34222 27223 0 41527 24258 0 0 146194 1631600 0 0 0 0 0 0 0 FFQ 64 85 0 0 575 0 0 0 7173 0 0 0 0 0 29209 0 0 0 0 0 0 0 0 0 0 0 86933 0 0 0 0 0 128172 0 0 177640 218110 148730 184567 1018806 0 0 0 0 0 0 FFQ 65 1 0 0 577 0 0 3700 0 0 0 0 23685 0 0 0 0 0 0 0 0 0 47641 0 0 0 0 0 0 0 0 0 0 179020 0 207200 0 327494 739814 470868 0 0 0 0 0 0 FFQ 66 0 40 417 637 0 0 0 6429 0 368 1344 0 26380 0 2210 496 621 0 0 2230 3978 0 3402 6968 88416 1982 0 3094 4338 0 69363 0 160889 0 0 133884 696981 501566 0 283967 0 0 0 0 0 FFQ 67 61 0 0 920 0 0 0 0 9270 0 0 0 0 0 0 35304 0 0 0 0 0 0 0 0 0 0 0 120926 0 0 0 0 0 0 256499 430239 310112 617263 0 0 219406 0 0 0 0 FFQ 68 27 0 0 0 620 0 0 7921 0 0 0 0 0 32164 0 0 0 0 0 0 0 0 0 0 92917 0 0 0 0 0 0 80162 0 0 0 598385 623682 564122 0 0 0 0 0 0 0 FFQ 69 0 0 0 0 687 0 0 8186 0 0 0 0 0 32588 0 0 0 0 0 0 0 0 0 0 0 0 93376 0 0 36690 0 0 0 283866 98481 0 0 1446126 0 0 0 0 0 0 0 FFQ 70 1 0 0 701 0 237 0 8137 0 0 0 0 0 32772 0 0 806 0 0 0 0 0 0 0 0 93419 0 0 0 23544 40490 17859 88151 0 31173 0 40359 54335 0 1568016 0 0 0 0 0 FFQ 71 21 0 0 0 0 666 0 0 6721 0 0 24582 0 0 0 0 0 0 0 0 0 0 0 76694 0 0 0 0 0 0 0 0 0 89410 223525 0 461619 658329 390457 0 67976 0 0 0 0 FFQ 72 0 0 0 0 0 692 0 6965 0 0 0 25344 0 0 0 0 0 0 0 0 0 78732 0 0 0 0 0 0 0 0 90910 0 0 0 225598 538011 597008 0 436740 0 0 0 0 0 0 FFQ 73 88 8 0 0 0 885 0 7148 0 0 0 25905 0 0 0 662 0 0 0 0 0 2342 79697 0 0 0 0 0 0 0 0 204727 19116 0 0 0 835239 285286 0 538897 0 0 0 0 0 FFQ 74 55 0 0 0 778 0 0 7565 0 0 0 27379 0 0 0 0 0 0 0 0 0 1331 81842 0 0 0 0 0 16384 0 0 0 0 0 208228 680113 0 550603 425722 0 0 0 0 0 0 FFQ 75 0 1 703 0 0 0 0 7597 0 0 0 0 33200 0 0 0 0 0 0 0 0 0 0 0 93179 0 0 0 0 0 0 0 0 0 0 0 0 1865320 0 0 0 0 0 0 0 FFQ 76 65 0 0 0 671 0 0 8845 0 0 0 0 0 33549 0 0 0 0 0 0 0 0 0 0 0 92395 0 0 0 0 0 75965 56590 99915 0 290341 424309 0 917355 0 0 0 0 0 0 FFQ 77 7 44 0 0 736 0 175 0 9302 0 0 0 0 34350 0 0 0 0 0 0 0 0 0 0 0 0 94117 0 0 0 21980 63532 81840 0 48202 57000 63449 1525266 0 0 0 0 0 0 0 FFQ 78 18 0 0 0 914 0 0 7393 0 0 0 25502 0 0 0 677 0 0 0 0 0 2652 0 76908 0 0 0 0 0 18003 0 67037 0 151719 270325 0 407874 398876 296604 275498 0 0 0 0 0 FFQ 79 0 29 0 105 1495 0 0 0 13499 0 0 0 0 0 0 300 0 62368 1103 0 0 872 1971 2583 1352 0 0 0 0 200302 13400 0 0 0 0 0 0 0 1700621 0 0 0 0 0 0 FFQ 80 0 213 0 1071 0 225 0 9191 0 0 0 0 1153 36266 0 117 0 440 358 807 1319 2485 0 0 0 0 0 115998 19815 0 0 0 0 0 158232 118902 251782 386286 265338 561751 68251 0 0 0 0 FFQ 81 0 0 0 0 0 1139 0 9724 0 0 0 0 0 37883 0 0 0 0 0 0 0 0 0 0 0 119858 0 0 0 0 0 66999 0 0 438363 295180 0 0 1030854 0 0 0 0 0 0 FFQ 82 36 340 0 40 1532 0 0 8106 0 0 0 0 35435 0 958 0 0 374 871 2039 0 0 0 0 0 91711 0 0 20047 40833 0 16749 0 0 15851 0 0 0 1765078 0 0 0 0 0 0 FFQ 83 3 0 0 0 825 0 0 8273 0 0 0 29241 0 0 0 0 0 0 0 0 0 0 84966 0 0 0 0 0 0 0 0 71811 104746 0 260674 149091 620061 0 203413 0 0 466896 0 0 0 FFQ 84 29 0 0 0 847 0 0 8758 0 0 0 29842 0 0 0 0 0 0 0 0 0 0 87169 0 0 0 0 0 0 0 0 52458 144817 0 462764 137998 0 1075318 0 0 0 0 0 0 0 FFQ 85 90 0 0 0 0 899 0 8959 0 0 0 30991 0 0 0 0 0 0 0 0 0 0 88361 0 0 0 0 0 0 53312 0 21197 0 114148 28011 0 0 0 1654032 0 0 0 0 0 0 FFQ 86 11 1 0 1293 0 0 0 11060 0 0 0 0 0 42555 0 0 0 0 0 0 0 0 0 0 0 130859 0 0 0 0 0 0 0 0 0 448921 612189 753111 0 0 0 0 0 0 0 FFQ 87 334 0 0 0 0 915 0 5910 0 0 0 35642 0 0 0 0 0 0 0 0 0 63325 0 0 0 0 0 0 0 104888 0 0 0 144093 0 523379 0 1026060 0 95454 0 0 0 0 0 FFQ 88 252 0 0 0 81 0 0 301 10406 0 0 32609 0 801 0 0 446 561 1343 0 1352 0 91772 0 0 0 0 0 0 0 0 0 0 0 239288 302983 587460 0 730345 0 0 0 0 0 0 FFQ 89 293 0 0 0 955 0 0 9885 0 0 0 0 40262 0 0 0 0 0 0 0 0 0 0 0 104884 0 0 0 0 47395 0 38969 56644 78784 106187 158684 0 0 1357058 0 0 0 0 0 0 FFQ 90 6 0 0 0 225 0 6256 950 0 642 0 38169 0 0 0 0 784 291 341 926 0 68240 0 0 0 0 0 0 0 0 107673 16902 0 0 205501 415589 573199 0 335846 0 0 228460 0 0 0 FFQ 91 169 0 0 0 0 1029 0 10495 0 0 0 0 42176 0 0 0 0 0 0 0 0 0 0 0 108273 0 0 0 0 0 63247 0 0 0 433706 0 703589 637316 0 0 0 0 0 0 0 FFQ 92 123 13 0 190 960 166 0 10457 472 0 384 0 0 42286 0 1109 551 269 946 1716 1756 2095 0 0 107761 0 0 0 0 0 0 15342 115505 0 392402 368109 319856 0 617532 0 0 0 0 0 0 FFQ 93 48 17 0 0 1177 0 216 10859 620 528 0 0 42857 0 0 0 0 790 614 2055 1235 3629 1665 110180 0 0 0 0 0 0 0 116857 0 0 167526 277830 929595 0 331702 0 0 0 0 0 0 FFQ 94 98 0 0 113 0 0 1049 6889 411 0 0 41431 0 0 0 0 0 358 1049 0 0 2436 723 71885 1443 0 0 30600 0 21761 23687 37587 85187 11025 0 33620 0 0 1628648 0 0 0 0 0 0 FFQ 95 2 0 0 0 1062 0 0 0 11416 0 0 38162 0 0 0 0 0 0 0 0 0 0 0 104954 0 0 0 0 0 0 140319 0 0 0 0 129978 189476 1384631 0 0 0 0 0 0 0 FFQ 96 183 0 0 0 0 0 1079 11853 0 0 0 38799 0 0 0 0 0 0 0 0 0 0 106127 0 0 0 0 0 0 61321 0 0 184877 0 503937 0 0 1091824 0 0 0 0 0 0 0 FFQ 97 0 0 0 0 0 1075 7426 0 0 0 0 44417 0 0 0 0 0 0 0 0 0 74426 0 0 0 0 0 0 0 0 118670 0 0 0 202645 0 1090524 460817 0 0 0 0 0 0 0 FFQ 98 149 0 0 0 107 1129 0 15184 470 0 0 0 0 54781 0 1034 0 0 0 0 0 0 0 0 0 132640 0 0 0 19882 0 0 0 0 138324 521825 268536 0 501483 0 0 344456 0 0 0 FFQ 99 249 0 0 0 1218 0 0 12807 0 0 0 0 49921 0 0 0 0 0 0 0 0 0 0 0 124146 0 0 0 0 0 0 0 195188 126142 210796 505406 0 774127 0 0 0 0 0 0 0 FFQ 100 1613 0 0 0 0 917 0 12105 0 0 0 64851 0 0 514 0 526 0 0 0 143984 0 0 0 0 0 0 0 86459 70306 0 0 19931 253112 0 152893 175594 1017195 0 0 0 0 0 0 0 # Last Fragment Qualities. Use `grep ^LFQ | cut -f 2-` to extract this part. # Columns correspond to qualities and rows to cycles. First column is the cycle number. LFQ 1 240 0 0 23 0 0 0 0 0 0 0 1306 0 0 0 0 0 18176 0 0 0 0 0 219031 1761224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LFQ 2 6 0 29 0 0 0 0 0 0 0 1263 0 0 0 0 13465 0 0 0 0 0 0 0 0 0 0 66633 0 0 0 0 0 1918604 0 0 0 0 0 0 0 0 0 0 0 0 LFQ 3 63 226 0 29 0 604 0 0 1154 0 0 9587 1726 0 0 808 0 1059 1360 2776 2496 0 43887 2828 0 0 8493 0 0 0 0 0 0 1922904 0 0 0 0 0 0 0 0 0 0 0 LFQ 4 52 0 20 0 0 0 10 187 0 122 1616 14875 512 0 0 0 0 582 0 0 0 0 0 57417 0 0 0 0 0 60196 0 115530 197701 0 111565 1439615 0 0 0 0 0 0 0 0 0 LFQ 5 38 16 0 173 0 514 74 0 1795 0 1016 15173 0 0 837 475 0 0 691 986 1800 1793 0 0 58565 0 0 0 0 0 0 0 0 15084 1900970 0 0 0 0 0 0 0 0 0 0 LFQ 6 8 0 0 46 0 0 0 652 0 0 10745 0 0 0 0 0 0 0 0 0 30440 0 0 0 0 0 0 0 0 58796 0 0 109725 44977 1092519 364183 287909 0 0 0 0 0 0 0 0 LFQ 7 0 7 0 82 0 0 150 2237 145 0 0 0 17913 503 0 0 0 0 0 0 0 0 0 0 0 76945 0 0 0 0 21646 0 106298 0 293829 407407 199211 873627 0 0 0 0 0 0 0 LFQ 8 16 5 0 0 51 0 61 212 1247 0 12800 0 0 0 0 0 0 265 0 465 0 0 51891 5536 1339 0 0 0 21732 0 29570 12536 0 13716 0 0 1848558 0 0 0 0 0 0 0 0 LFQ 9 0 113 0 211 0 0 0 1863 0 0 535 15639 0 0 0 0 0 783 336 4318 1755 0 0 0 59141 0 0 0 0 0 24388 94793 56450 102719 39359 0 1597597 0 0 0 0 0 0 0 0 LFQ 10 14 0 0 0 0 0 111 1930 0 0 0 15998 0 0 0 0 0 0 0 0 0 0 0 71678 0 0 0 0 0 0 0 0 60834 0 257271 1082363 216989 0 292812 0 0 0 0 0 0 LFQ 11 0 0 67 0 0 0 0 0 1999 0 0 16487 0 0 0 0 0 0 0 0 0 0 0 0 61339 0 0 0 0 0 39374 0 53441 91721 0 541570 1194002 0 0 0 0 0 0 0 0 LFQ 12 154 0 0 0 97 0 0 1624 0 0 13933 0 0 0 0 0 0 0 0 0 0 0 0 54453 0 0 0 0 0 0 66456 0 0 0 238122 0 239669 810358 365715 0 0 209419 0 0 0 LFQ 13 110 119 0 176 0 0 945 601 0 0 11968 0 0 1808 1171 0 2078 7417 3717 2733 31852 0 2659 0 0 0 0 0 0 61584 0 0 0 113597 155857 857310 0 364706 0 379592 0 0 0 0 0 LFQ 14 476 0 0 0 16 184 888 92 0 12061 0 0 0 0 0 0 0 427 0 347 33169 1643 1625 1016 0 0 0 0 0 48377 0 0 82255 0 459893 0 362044 357275 638212 0 0 0 0 0 0 LFQ 15 119 0 0 166 0 61 0 3175 0 0 0 497 20953 0 0 0 0 0 0 0 1768 0 0 0 0 85844 0 0 0 0 20382 0 65853 0 438634 71942 0 1156418 0 134188 0 0 0 0 0 LFQ 16 104 0 328 0 28 0 2712 0 0 0 15691 0 1319 0 0 1005 937 0 0 0 0 0 63626 2333 3961 1760 0 3775 0 0 0 0 98283 96592 0 230869 79879 0 1396798 0 0 0 0 0 0 LFQ 17 32 0 59 293 208 0 640 0 2965 0 0 18675 487 1906 0 0 0 0 0 3053 933 2803 739 2152 79827 0 0 0 0 0 70279 0 0 123537 0 169520 0 744604 595929 181359 0 0 0 0 0 LFQ 18 103 0 3 0 140 70 0 2915 0 238 0 19940 0 0 299 0 605 424 320 430 0 0 0 0 67404 0 0 0 0 0 79966 0 0 0 115263 252657 138635 723214 0 346544 0 0 250830 0 0 LFQ 19 45 0 0 0 174 0 2375 0 0 0 0 17243 0 0 0 0 0 0 0 0 0 0 60640 0 0 0 0 0 0 0 0 169596 150814 0 0 0 324039 0 231746 1043328 0 0 0 0 0 LFQ 20 3 16 159 0 181 0 2496 563 0 0 14094 0 0 0 0 2298 590 0 0 2219 56225 0 0 1270 1579 0 0 0 0 0 65934 0 12714 107312 0 324337 559952 333434 448896 65728 0 0 0 0 0 LFQ 21 15 25 221 0 611 0 0 2621 804 0 14421 0 0 0 467 0 873 0 1542 1460 55236 4942 873 0 0 0 0 0 0 50426 0 9710 0 0 296156 270827 536873 751897 0 0 0 0 0 0 0 LFQ 22 151 0 0 0 0 209 0 2835 0 15272 0 0 0 0 0 0 0 0 0 0 57025 0 0 0 0 0 0 0 68503 0 0 0 174905 110845 0 0 448543 659490 398520 63702 0 0 0 0 0 LFQ 23 186 8 312 0 200 533 2895 642 0 0 19018 0 1295 1369 0 2084 1150 0 7075 2891 5389 63749 2884 0 5846 0 0 0 13110 0 73970 0 0 0 219025 308358 0 793326 370774 0 0 103911 0 0 0 LFQ 24 136 0 0 0 0 239 3252 0 0 0 16148 0 0 0 0 0 0 0 0 0 58060 0 0 0 0 0 0 0 0 0 52310 78629 0 114117 0 313553 455907 358135 0 549514 0 0 0 0 0 LFQ 25 152 0 0 353 0 0 0 4127 0 0 0 24188 0 0 0 0 0 0 0 0 0 0 0 89221 0 0 0 0 0 0 39988 0 138129 166733 48622 0 89415 0 0 1399072 0 0 0 0 0 LFQ 26 38 0 0 40 0 0 2301 115 0 18932 0 0 0 0 0 0 0 0 0 40814 0 0 0 0 0 0 0 0 0 0 73199 80463 0 0 153022 257080 759417 337366 0 277213 0 0 0 0 0 LFQ 27 252 0 0 0 441 94 0 4638 0 0 443 25679 0 0 0 0 0 0 1469 0 0 0 0 0 91986 0 0 0 0 0 27994 33574 85228 49140 76443 90353 1512266 0 0 0 0 0 0 0 0 LFQ 28 0 5 0 0 330 0 72 3840 0 0 22195 413 0 0 0 0 0 1350 0 918 0 2878 69441 4068 0 2078 2459 0 0 0 8524 80875 0 0 286404 0 560146 364094 589910 0 0 0 0 0 0 LFQ 29 27 0 0 340 0 0 4092 0 0 0 19031 0 0 0 0 0 0 0 0 64678 0 0 0 0 0 0 0 57534 0 50961 0 0 73346 60911 0 61408 0 1607672 0 0 0 0 0 0 0 LFQ 30 20 0 0 0 0 349 2438 0 0 0 20971 0 0 0 0 0 0 0 0 44731 0 0 0 0 0 0 0 0 0 0 78720 0 113404 0 513895 0 389835 0 429335 318134 0 88168 0 0 0 LFQ 31 131 0 0 0 0 368 0 4410 0 0 24571 0 0 0 0 0 0 0 0 0 0 74345 0 0 0 0 0 0 85379 0 0 0 0 0 138583 457163 312416 85297 391870 425467 0 0 0 0 0 LFQ 32 60 0 19 0 0 344 395 5838 0 872 0 28092 0 0 445 3418 519 0 0 831 556 0 84108 0 0 0 0 15704 0 0 0 95139 116082 0 0 0 616283 698544 332751 0 0 0 0 0 0 LFQ 33 247 24 0 280 413 33 135 3590 514 0 22621 0 0 0 1981 760 479 1376 3417 3016 47807 0 973 0 0 0 0 0 0 81131 0 10834 0 146650 18383 290075 198327 638354 528580 0 0 0 0 0 0 LFQ 34 201 39 0 0 606 0 5205 0 0 0 21486 0 0 487 0 0 0 298 0 0 71472 620 1766 1018 1417 0 0 0 0 80845 0 130514 0 15892 0 0 619272 676272 372590 0 0 0 0 0 0 LFQ 35 23 41 923 0 0 0 0 6223 0 0 22479 0 0 0 2219 0 4408 0 2266 1784 71411 1663 0 0 0 0 0 0 8937 0 62335 0 0 92847 133118 306742 764551 0 518030 0 0 0 0 0 0 LFQ 36 0 0 0 0 490 0 5399 0 0 0 23163 0 0 0 0 0 0 0 0 74515 0 0 0 0 0 0 0 0 0 0 85030 0 104263 0 194212 620164 0 165241 727523 0 0 0 0 0 0 LFQ 37 0 0 0 0 576 0 3350 0 0 26294 0 0 0 0 0 0 0 0 0 51810 0 0 0 0 0 0 0 0 70098 0 0 115141 0 0 0 814369 569152 0 349210 0 0 0 0 0 0 LFQ 38 35 0 0 38 768 0 5671 339 0 0 29296 0 486 0 991 0 0 0 0 457 540 0 87331 1171 2516 0 0 0 0 0 72165 0 32946 0 0 255712 266835 0 907749 0 334954 0 0 0 0 LFQ 39 71 3 0 0 697 0 6281 0 0 0 31433 0 0 0 0 0 402 0 1211 2488 0 87225 0 0 0 0 0 0 0 74481 0 0 0 142307 183585 0 518182 686620 265014 0 0 0 0 0 0 LFQ 40 73 8 205 56 523 0 502 6166 366 0 30723 0 0 0 1192 920 0 697 726 1416 0 91930 12293 0 2813 0 0 7010 0 0 0 99538 0 65717 101402 0 795370 780354 0 0 0 0 0 0 0 LFQ 41 81 0 173 0 556 0 523 8159 0 0 0 36666 1271 0 589 432 0 1170 1438 441 0 0 100616 0 0 0 0 0 0 0 84726 17220 0 122218 170921 835565 0 300285 0 0 316950 0 0 0 0 LFQ 42 593 0 0 0 0 618 6837 0 0 0 33487 0 0 0 0 0 0 0 0 0 0 93981 0 0 0 0 0 0 0 0 104653 0 0 602060 0 314155 382740 142382 318494 0 0 0 0 0 0 LFQ 43 357 0 0 797 0 0 0 7803 0 0 0 34243 787 0 0 0 0 0 0 0 1821 0 90743 0 0 0 0 0 0 34064 0 0 0 49082 268535 94409 0 1417359 0 0 0 0 0 0 0 LFQ 44 202 0 90 0 0 4107 639 0 372 28469 0 0 0 0 1447 0 379 614 0 52460 457 0 0 0 0 0 37131 0 18105 16599 14975 61353 0 0 0 0 0 1762601 0 0 0 0 0 0 0 LFQ 45 56 0 0 754 0 0 4313 0 0 0 28699 0 0 0 0 0 0 0 0 53526 0 0 0 0 0 0 0 0 88640 0 0 0 153357 202559 0 0 1417851 0 50245 0 0 0 0 0 0 LFQ 46 1 0 199 109 719 650 0 7099 361 0 32005 0 0 1291 0 172 235 2467 893 4814 0 2675 86074 3418 0 0 2402 0 0 6753 93147 0 0 110799 216453 983625 318898 124741 0 0 0 0 0 0 0 LFQ 47 24 20 0 221 700 100 358 9350 499 0 0 36739 0 0 324 1423 2166 309 353 0 577 0 95612 0 0 0 0 0 0 0 0 120574 0 0 0 162673 581829 313131 0 235674 316207 0 121137 0 0 LFQ 48 81 0 0 0 0 0 10390 0 0 0 0 38834 0 0 0 0 0 0 0 0 0 0 99554 0 0 0 0 0 0 0 0 106745 0 163492 0 501269 254604 0 436598 388433 0 0 0 0 0 LFQ 49 0 0 0 0 0 808 0 7825 0 0 29293 0 0 0 0 0 0 0 0 0 83761 0 0 0 0 0 0 0 0 68582 0 0 99206 139078 0 188691 569540 297243 0 515973 0 0 0 0 0 LFQ 50 32 0 0 0 813 0 0 8194 0 0 29530 0 0 0 0 0 0 0 0 0 84756 0 0 0 0 0 0 0 0 91682 0 0 0 0 778603 197665 0 364521 444204 0 0 0 0 0 0 LFQ 51 0 0 0 822 0 0 0 7602 0 0 27999 0 0 0 0 0 0 0 0 0 80213 0 0 0 0 0 0 0 46948 0 86254 0 154234 0 0 151588 477926 87489 878925 0 0 0 0 0 0 LFQ 52 122 13 67 832 0 313 0 9528 0 0 0 38708 728 0 0 0 0 0 0 0 0 0 0 98354 0 0 0 0 36015 0 0 67555 56141 0 217991 197973 0 0 1275660 0 0 0 0 0 0 LFQ 53 190 28 0 0 202 832 7887 0 0 0 35418 0 0 0 0 0 0 0 0 1854 0 90239 0 0 0 0 0 0 0 0 20489 52404 88685 141510 326173 0 163081 0 1071008 0 0 0 0 0 0 LFQ 54 321 0 0 14 130 871 8009 0 0 551 35867 0 0 0 0 0 0 0 0 1464 0 95056 3056 1304 1485 1861 0 0 0 0 82538 0 75446 135380 225203 0 308727 338602 0 684115 0 0 0 0 0 LFQ 55 484 0 0 0 887 0 8434 0 0 0 36909 0 0 0 0 0 0 0 0 0 0 94871 0 0 0 0 0 0 0 0 0 76457 0 108168 150653 0 561058 761196 200883 0 0 0 0 0 0 LFQ 56 322 0 0 877 0 0 0 8781 0 0 37782 0 0 0 0 0 0 0 0 0 0 96186 0 0 0 0 0 0 0 77108 0 0 0 0 0 569324 572225 0 365365 0 272030 0 0 0 0 LFQ 57 31 0 104 953 0 339 5461 0 0 34434 0 0 0 849 0 0 0 0 0 61025 0 0 0 0 0 0 0 0 58306 0 72292 0 38354 255760 0 178671 0 0 1293421 0 0 0 0 0 0 LFQ 58 123 0 0 0 937 0 0 9092 587 0 38483 0 0 0 0 0 1417 0 0 0 0 97620 0 0 0 0 0 0 0 102506 0 0 0 0 214463 20156 120738 358171 869616 0 0 0 0 166091 0 LFQ 59 214 1 0 974 0 0 9249 0 0 0 33397 0 0 0 0 0 0 0 0 0 91980 0 0 0 0 0 0 0 0 0 0 96603 0 148697 0 0 1118459 0 385059 115367 0 0 0 0 0 LFQ 60 57 0 0 121 948 0 9449 0 554 0 40422 0 0 0 875 0 0 0 0 0 0 101460 0 0 0 0 0 0 0 0 0 230349 0 0 218089 21664 897396 366809 0 0 0 111807 0 0 0 LFQ 61 303 0 124 0 0 1067 0 8610 500 29560 0 0 0 0 0 181 0 1195 1965 78210 515 0 0 0 0 0 0 0 0 28386 34263 93946 61803 40536 84403 72285 0 0 1462148 0 0 0 0 0 0 LFQ 62 82 0 0 0 1064 83 0 8847 295 0 36447 0 667 0 0 0 0 0 397 0 0 89678 2838 1154 0 0 1963 0 0 0 69111 0 81994 125075 335701 0 508152 736452 0 0 0 0 0 0 0 LFQ 63 356 37 0 0 0 1310 0 9134 0 482 36464 0 0 0 0 0 0 0 0 0 445 91221 0 6895 1594 0 0 2854 0 34682 22889 19790 115099 0 0 0 44845 1611903 0 0 0 0 0 0 0 LFQ 64 243 15 0 0 0 1506 9182 0 117 0 37576 0 881 0 0 0 0 0 0 0 0 91066 940 1307 6401 1806 2306 0 0 0 7827 0 92638 108733 192793 0 367267 754515 0 322881 0 0 0 0 0 LFQ 65 0 0 0 1644 0 0 0 11396 0 0 0 43562 0 0 0 0 0 0 0 0 0 0 0 119685 0 0 0 0 0 0 61863 0 0 0 292798 0 237195 350567 881290 0 0 0 0 0 0 LFQ 66 19 0 0 0 1155 0 0 12328 0 0 0 44229 0 0 0 0 0 0 0 0 0 0 103900 0 0 0 0 0 0 0 105150 0 0 157815 479857 266577 382231 0 446739 0 0 0 0 0 0 LFQ 67 5 0 0 0 0 0 1684 11973 0 0 0 0 45682 0 0 0 0 0 0 0 0 0 123252 0 0 0 0 0 0 0 0 0 63065 217071 202497 118090 0 52979 1163702 0 0 0 0 0 0 LFQ 68 50 0 69 19 1260 0 11037 0 0 0 40083 0 0 746 0 967 0 0 0 532 1335 96876 2973 4887 8149 0 4743 0 0 6216 52816 0 108792 0 512042 0 981523 0 0 0 164885 0 0 0 0 LFQ 69 63 0 111 0 1211 314 13041 0 0 766 0 46200 0 0 0 0 0 274 413 1850 580 0 106571 1014 0 0 0 0 37577 0 0 69713 0 0 327961 0 201300 0 1191041 0 0 0 0 0 0 LFQ 70 1 0 0 1309 0 0 0 10696 0 0 43053 0 0 0 0 0 0 0 0 0 100253 0 0 0 0 0 0 0 55385 0 0 99213 0 0 0 401296 365254 0 0 923540 0 0 0 0 0 LFQ 71 6 0 0 0 1248 0 6900 0 0 0 40253 0 0 0 0 0 0 0 0 65357 0 0 0 0 0 0 0 0 0 60396 60882 0 78090 0 272869 359762 0 0 1054237 0 0 0 0 0 0 LFQ 72 1 0 0 0 1323 0 7275 578 0 0 40123 0 0 0 0 0 0 985 66976 1495 548 807 892 0 0 0 0 0 98737 0 0 0 0 0 340402 272742 697028 352461 0 0 0 0 117627 0 0 LFQ 73 0 1 0 0 1333 0 11762 0 0 0 37759 0 0 0 0 0 0 0 0 95523 0 0 0 0 0 0 0 33586 0 0 62701 0 0 0 0 388515 0 75724 0 1293096 0 0 0 0 0 LFQ 74 53 0 0 1342 0 0 12059 0 0 0 46750 0 0 0 0 0 0 0 0 0 106057 0 0 0 0 0 0 0 0 0 105482 0 122211 213236 294959 0 423539 674312 0 0 0 0 0 0 0 LFQ 75 80 0 449 0 1325 0 7504 0 0 1210 42921 0 0 0 0 2109 871 308 69285 0 595 1635 0 0 0 0 0 0 117087 0 0 134488 0 0 198018 341753 0 268729 738354 0 73279 0 0 0 0 LFQ 76 76 1 0 1405 0 116 8017 0 0 43838 0 0 0 961 0 0 328 454 0 70895 1313 0 744 0 0 0 0 103735 0 0 0 0 135472 198248 16881 0 928229 378333 0 0 0 0 110954 0 0 LFQ 77 84 26 0 74 1406 454 12246 0 0 0 40044 0 752 0 0 0 0 1427 359 98137 0 2241 2684 0 0 0 0 0 44136 54210 0 0 174433 80502 117384 248304 0 1121097 0 0 0 0 0 0 0 LFQ 78 206 0 0 1506 0 693 12828 655 0 0 40170 0 0 1055 0 0 935 1437 1206 102218 1168 0 788 0 0 0 0 35004 0 41137 48560 56542 0 87692 111529 0 0 1388492 66179 0 0 0 0 0 0 LFQ 79 601 0 0 1460 159 0 8270 577 0 561 46155 0 0 1269 0 1033 0 0 0 71223 0 0 0 0 0 0 0 0 106516 20830 0 0 21384 0 200915 475211 524718 148373 0 0 370745 0 0 0 0 LFQ 80 517 0 0 211 1663 0 0 14448 0 0 42029 0 0 0 0 332 2232 1956 352 102783 0 0 0 0 0 0 0 77808 0 0 0 0 0 0 158405 20080 787116 264784 0 271645 253639 0 0 0 0 LFQ 81 565 0 0 0 1543 0 13758 0 0 43748 0 0 0 0 0 0 0 0 0 106493 0 0 0 0 0 0 0 0 0 104824 0 0 0 119099 356157 0 519964 147699 300082 286068 0 0 0 0 0 LFQ 82 703 1 0 28 1693 0 8807 0 0 49736 0 0 0 0 1498 0 0 0 0 75734 0 0 0 0 0 0 67448 0 0 0 43609 64268 216110 0 161074 91920 0 0 1217371 0 0 0 0 0 0 LFQ 83 366 183 0 131 0 1560 0 13915 1289 0 44461 0 0 0 0 1029 1303 0 1641 106945 587 0 1885 2102 1464 0 0 0 0 0 58133 148149 0 12752 0 19808 574079 0 0 1008218 0 0 0 0 0 LFQ 84 169 0 0 126 1551 0 0 14466 1276 0 45764 0 411 0 150 376 213 0 0 110176 0 0 0 0 0 0 0 0 0 0 82395 81314 0 0 141075 508410 358104 654024 0 0 0 0 0 0 0 LFQ 85 7 14 0 0 1566 345 9508 74 789 0 52372 0 0 0 0 0 721 987 80779 0 0 639 0 0 0 0 0 0 0 0 116306 0 114361 0 216249 341003 292905 588470 0 182905 0 0 0 0 0 LFQ 86 65 1 0 1690 289 45 0 15405 0 839 48553 0 0 0 0 0 1971 0 0 114768 0 0 0 0 0 0 0 0 18683 20297 30397 22353 77967 32509 0 19074 0 1595094 0 0 0 0 0 0 0 LFQ 87 12 1 0 1703 0 0 15775 0 0 49401 0 0 0 0 0 0 0 0 0 117243 0 0 0 0 0 0 0 0 86466 0 0 153337 0 0 271638 278601 363577 259308 402938 0 0 0 0 0 0 LFQ 88 77 0 0 0 1263 0 10978 0 0 46770 0 0 0 0 1052 0 0 92517 183 0 1169 560 1843 1484 0 0 73299 0 0 0 0 100632 0 151138 0 0 557980 407090 551965 0 0 0 0 0 0 LFQ 89 20 0 0 0 1729 0 10349 0 0 0 57707 0 0 0 0 0 0 0 86501 0 0 0 0 0 0 0 99209 0 0 0 0 0 112141 0 0 0 654134 284035 284732 0 0 409443 0 0 0 LFQ 90 65 212 0 0 1718 0 0 16639 0 675 51512 0 0 1261 613 0 472 647 0 121627 0 0 0 0 0 0 0 0 115537 0 0 18934 0 168069 0 346617 484490 583699 87213 0 0 0 0 0 0 LFQ 91 66 0 0 1258 0 0 11456 0 0 50230 0 0 0 0 0 0 0 97773 0 0 0 0 0 0 55919 0 0 21758 48915 0 0 89014 0 34115 0 0 0 1589496 0 0 0 0 0 0 0 LFQ 92 140 0 0 0 0 1843 11122 0 0 0 60753 0 0 0 0 0 0 0 0 90325 0 0 0 0 0 0 0 78595 0 0 107259 0 0 0 0 476723 175177 0 253700 744363 0 0 0 0 0 LFQ 93 186 1 0 0 1888 0 17830 0 0 0 55294 0 0 0 0 0 0 0 0 127168 0 0 0 0 0 0 0 0 0 92980 0 125478 0 0 0 285709 0 698539 0 594927 0 0 0 0 0 LFQ 94 19 0 0 0 1891 0 11835 0 0 0 63167 0 0 0 0 0 0 0 93213 0 0 0 0 0 0 0 0 131161 0 0 0 0 0 164968 0 229632 0 606105 579240 0 0 0 118769 0 0 LFQ 95 12 0 25 1917 241 0 0 18752 0 712 56412 0 0 0 1660 341 274 942 369 130718 0 0 0 0 0 0 0 67473 0 0 0 98489 54348 176821 95951 105449 0 136452 0 1052642 0 0 0 0 0 LFQ 96 8 0 0 0 245 1938 0 12257 0 702 65774 0 0 0 0 0 0 1399 891 95280 1469 0 771 0 0 0 0 107011 0 0 0 0 119321 0 170492 0 519391 257593 0 276678 368780 0 0 0 0 LFQ 97 95 0 0 1975 0 0 12366 0 0 0 67047 0 0 0 0 0 0 0 0 96935 0 0 0 0 0 0 0 0 84039 0 81554 0 0 271184 337286 0 200162 847357 0 0 0 0 0 0 0 LFQ 98 233 0 0 2021 0 0 12750 0 0 0 68835 0 0 0 0 0 0 0 0 98185 0 0 0 0 0 0 0 0 138309 0 0 0 0 0 171265 339122 335697 598297 0 235286 0 0 0 0 0 LFQ 99 305 1 0 0 0 2044 0 13281 0 0 0 70367 0 0 0 0 0 0 0 0 100388 0 0 0 0 0 0 0 0 169772 0 0 102913 194194 81146 0 0 1265589 0 0 0 0 0 0 0 LFQ 100 2517 0 0 182 0 1417 19739 0 0 0 89015 0 0 1560 0 0 0 546 169795 690 0 0 0 0 0 0 0 0 128003 0 0 0 166459 0 18307 205102 722506 196529 0 0 277633 0 0 0 0 # GC Content of first fragments. Use `grep ^GCF | cut -f 2-` to extract this part. GCF 0.25 415 GCF 1.01 645 GCF 2.01 1176 GCF 3.02 1780 GCF 4.02 2718 GCF 5.03 4234 GCF 6.03 5881 GCF 7.04 8090 GCF 8.04 11054 GCF 9.05 14364 GCF 10.05 18046 GCF 11.06 22379 GCF 12.06 26670 GCF 13.07 31488 GCF 14.07 36268 GCF 15.08 41059 GCF 16.08 45424 GCF 17.09 49797 GCF 18.09 52378 GCF 19.10 55027 GCF 20.10 55961 GCF 21.11 55436 GCF 22.11 54186 GCF 23.12 52219 GCF 24.12 48849 GCF 25.13 45157 GCF 26.13 40640 GCF 27.14 36592 GCF 28.14 33196 GCF 29.15 30560 GCF 30.15 28094 GCF 31.16 26043 GCF 32.16 23469 GCF 33.17 20374 GCF 34.17 17185 GCF 35.18 13948 GCF 36.18 11332 GCF 37.19 9480 GCF 38.19 7965 GCF 39.20 7098 GCF 40.20 6604 GCF 41.21 6321 GCF 42.21 6532 GCF 43.22 6535 GCF 44.22 7036 GCF 45.23 7597 GCF 46.23 8704 GCF 47.24 9798 GCF 48.24 11336 GCF 49.25 13090 GCF 50.25 15484 GCF 51.26 18371 GCF 52.26 21534 GCF 53.27 26341 GCF 54.27 31122 GCF 55.28 36870 GCF 56.28 42771 GCF 57.29 48322 GCF 58.29 54755 GCF 59.30 58930 GCF 60.30 62956 GCF 61.31 64269 GCF 62.31 64025 GCF 63.32 60600 GCF 64.32 55848 GCF 65.33 49336 GCF 66.33 41271 GCF 67.34 33696 GCF 68.34 26093 GCF 69.35 19393 GCF 70.35 13798 GCF 71.36 9383 GCF 72.36 5964 GCF 73.37 3671 GCF 74.37 2128 GCF 75.38 1203 GCF 76.38 672 GCF 77.39 382 GCF 78.39 223 GCF 79.40 132 GCF 80.40 88 GCF 81.41 43 GCF 82.41 34 GCF 83.42 28 GCF 84.42 16 GCF 85.43 9 GCF 86.43 2 GCF 87.44 3 GCF 88.94 1 GCF 90.45 0 GCF 91.96 1 # GC Content of last fragments. Use `grep ^GCL | cut -f 2-` to extract this part. GCL 0.25 475 GCL 1.01 768 GCL 2.01 1285 GCL 3.02 1943 GCL 4.02 2909 GCL 5.03 4212 GCL 6.03 6009 GCL 7.04 7874 GCL 8.04 10437 GCL 9.05 13722 GCL 10.05 17351 GCL 11.06 21221 GCL 12.06 25645 GCL 13.07 30596 GCL 14.07 35754 GCL 15.08 40722 GCL 16.08 45327 GCL 17.09 49334 GCL 18.09 52615 GCL 19.10 54516 GCL 20.10 55909 GCL 21.11 56016 GCL 22.11 54776 GCL 23.12 52412 GCL 24.12 49148 GCL 25.13 45534 GCL 26.13 41520 GCL 27.14 37038 GCL 28.14 33887 GCL 29.15 30803 GCL 30.15 28043 GCL 31.16 26403 GCL 32.16 23812 GCL 33.17 20360 GCL 34.17 17397 GCL 35.18 14426 GCL 36.18 11558 GCL 37.19 9489 GCL 38.19 8078 GCL 39.20 7094 GCL 40.20 6639 GCL 41.21 6368 GCL 42.21 6443 GCL 43.22 6378 GCL 44.22 6874 GCL 45.23 7727 GCL 46.23 8707 GCL 47.24 9615 GCL 48.24 11404 GCL 49.25 12862 GCL 50.25 15430 GCL 51.26 18144 GCL 52.26 21634 GCL 53.27 25988 GCL 54.27 30653 GCL 55.28 35855 GCL 56.28 42219 GCL 57.29 48360 GCL 58.29 53865 GCL 59.30 58676 GCL 60.30 62348 GCL 61.31 63841 GCL 62.31 63297 GCL 63.32 60245 GCL 64.32 55904 GCL 65.33 49493 GCL 66.33 41718 GCL 67.34 34268 GCL 68.34 26762 GCL 69.35 20206 GCL 70.35 14438 GCL 71.36 9935 GCL 72.36 6497 GCL 73.37 3991 GCL 74.37 2505 GCL 75.38 1497 GCL 76.38 891 GCL 77.39 555 GCL 78.39 357 GCL 79.40 233 GCL 80.40 123 GCL 81.41 109 GCL 82.91 90 GCL 84.42 73 GCL 85.43 59 GCL 86.43 41 GCL 87.44 40 GCL 88.44 37 GCL 89.45 19 GCL 90.45 17 GCL 91.46 20 GCL 92.46 16 GCL 93.47 14 GCL 94.47 4 GCL 95.98 3 GCL 97.49 2 # ACGT content per cycle. Use `grep ^GCC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] GCC 1 31.41 20.19 20.77 27.63 0.03 0.00 GCC 2 32.39 17.19 19.84 30.57 0.01 0.00 GCC 3 30.62 19.83 18.49 31.05 0.00 0.00 GCC 4 30.39 19.35 19.82 30.45 0.02 0.00 GCC 5 30.74 18.98 19.67 30.62 0.00 0.00 GCC 6 30.14 20.07 19.66 30.13 0.01 0.00 GCC 7 30.35 19.33 20.02 30.29 0.00 0.00 GCC 8 30.60 19.48 19.02 30.89 0.00 0.00 GCC 9 30.13 19.73 19.49 30.65 0.00 0.00 GCC 10 30.58 19.37 19.77 30.28 0.00 0.00 GCC 11 30.74 19.17 19.37 30.72 0.01 0.00 GCC 12 30.39 19.68 19.43 30.50 0.00 0.00 GCC 13 30.55 19.41 19.65 30.38 0.00 0.00 GCC 14 30.78 19.21 19.39 30.62 0.01 0.00 GCC 15 30.37 19.69 19.48 30.46 0.00 0.00 GCC 16 30.43 19.47 19.74 30.37 0.00 0.00 GCC 17 30.68 19.33 19.38 30.61 0.00 0.00 GCC 18 30.25 19.80 19.54 30.40 0.00 0.00 GCC 19 30.32 19.62 19.88 30.19 0.00 0.00 GCC 20 30.53 19.43 19.52 30.51 0.00 0.00 GCC 21 30.15 19.87 19.65 30.33 0.00 0.00 GCC 22 30.30 19.68 19.93 30.08 0.00 0.00 GCC 23 30.54 19.45 19.60 30.41 0.00 0.00 GCC 24 30.17 19.92 19.71 30.20 0.01 0.00 GCC 25 30.30 19.72 19.90 30.08 0.00 0.00 GCC 26 30.48 19.48 19.60 30.43 0.03 0.00 GCC 27 30.07 19.98 19.74 30.20 0.01 0.00 GCC 28 30.19 19.79 19.96 30.06 0.00 0.00 GCC 29 30.43 19.58 19.63 30.37 0.00 0.00 GCC 30 30.03 19.97 19.83 30.17 0.00 0.00 GCC 31 30.21 19.76 20.02 30.00 0.00 0.00 GCC 32 30.41 19.56 19.71 30.32 0.00 0.00 GCC 33 30.07 19.97 19.82 30.14 0.01 0.00 GCC 34 30.20 19.77 20.06 29.97 0.01 0.00 GCC 35 30.39 19.60 19.69 30.31 0.00 0.00 GCC 36 30.02 20.02 19.88 30.08 0.00 0.00 GCC 37 30.17 19.82 20.04 29.96 0.00 0.00 GCC 38 30.40 19.58 19.70 30.32 0.00 0.00 GCC 39 29.96 20.02 19.88 30.14 0.01 0.00 GCC 40 30.15 19.80 20.11 29.94 0.01 0.00 GCC 41 30.35 19.63 19.78 30.25 0.00 0.00 GCC 42 30.00 20.03 19.90 30.07 0.03 0.00 GCC 43 30.14 19.85 20.06 29.95 0.02 0.00 GCC 44 30.39 19.61 19.77 30.22 0.01 0.00 GCC 45 29.98 20.01 19.91 30.10 0.00 0.00 GCC 46 30.15 19.86 20.06 29.93 0.00 0.00 GCC 47 30.37 19.59 19.77 30.27 0.00 0.00 GCC 48 30.02 20.04 19.89 30.05 0.00 0.00 GCC 49 30.08 19.90 20.08 29.94 0.00 0.00 GCC 50 30.33 19.64 19.79 30.24 0.00 0.00 GCC 51 30.01 19.99 19.93 30.07 0.00 0.00 GCC 52 30.13 19.88 20.09 29.90 0.01 0.00 GCC 53 30.32 19.66 19.74 30.28 0.02 0.00 GCC 54 30.00 20.04 19.95 30.01 0.01 0.00 GCC 55 30.11 19.89 20.08 29.92 0.01 0.00 GCC 56 30.38 19.67 19.74 30.22 0.01 0.00 GCC 57 29.95 20.05 19.96 30.04 0.00 0.00 GCC 58 30.12 19.86 20.11 29.92 0.01 0.00 GCC 59 30.33 19.64 19.80 30.23 0.01 0.00 GCC 60 29.95 20.05 19.94 30.05 0.00 0.00 GCC 61 30.11 19.86 20.12 29.90 0.01 0.00 GCC 62 30.38 19.63 19.74 30.24 0.00 0.00 GCC 63 30.03 20.02 19.89 30.06 0.01 0.00 GCC 64 30.13 19.84 20.12 29.91 0.01 0.00 GCC 65 30.34 19.59 19.81 30.26 0.00 0.00 GCC 66 29.95 20.08 19.91 30.06 0.00 0.00 GCC 67 30.07 19.89 20.07 29.98 0.00 0.00 GCC 68 30.36 19.63 19.77 30.24 0.00 0.00 GCC 69 29.97 20.06 19.95 30.03 0.00 0.00 GCC 70 30.11 19.88 20.12 29.90 0.00 0.00 GCC 71 30.30 19.69 19.76 30.25 0.00 0.00 GCC 72 30.01 20.04 19.90 30.04 0.00 0.00 GCC 73 30.12 19.89 20.11 29.88 0.00 0.00 GCC 74 30.34 19.66 19.77 30.24 0.00 0.00 GCC 75 29.98 20.13 19.90 29.98 0.00 0.00 GCC 76 30.15 19.84 20.09 29.93 0.00 0.00 GCC 77 30.33 19.65 19.79 30.23 0.00 0.00 GCC 78 29.97 20.04 19.97 30.02 0.01 0.00 GCC 79 30.10 19.88 20.10 29.93 0.02 0.00 GCC 80 30.37 19.65 19.76 30.22 0.01 0.00 GCC 81 30.01 20.05 19.93 30.01 0.01 0.00 GCC 82 30.14 19.85 20.13 29.88 0.02 0.00 GCC 83 30.33 19.64 19.79 30.24 0.01 0.00 GCC 84 30.00 20.04 19.94 30.02 0.00 0.00 GCC 85 30.07 19.88 20.13 29.92 0.00 0.00 GCC 86 30.37 19.65 19.77 30.20 0.00 0.00 GCC 87 29.99 20.08 19.93 30.00 0.01 0.00 GCC 88 30.11 19.82 20.12 29.95 0.01 0.00 GCC 89 30.30 19.63 19.81 30.27 0.01 0.00 GCC 90 29.98 20.07 19.95 30.00 0.00 0.00 GCC 91 30.15 19.87 20.11 29.87 0.01 0.00 GCC 92 30.36 19.62 19.81 30.20 0.01 0.00 GCC 93 29.98 20.04 19.98 30.00 0.01 0.00 GCC 94 30.15 19.88 20.11 29.86 0.00 0.00 GCC 95 30.33 19.71 19.81 30.16 0.00 0.00 GCC 96 30.01 20.10 19.92 29.98 0.00 0.00 GCC 97 30.17 19.87 20.10 29.85 0.00 0.00 GCC 98 30.36 19.66 19.79 30.19 0.01 0.00 GCC 99 29.95 20.07 19.96 30.02 0.01 0.00 GCC 100 29.96 19.97 20.29 29.78 0.10 0.00 # ACGT content per cycle for first fragments. Use `grep ^FBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] FBC 1 31.29 20.15 21.07 27.50 0.06 0.00 FBC 2 32.07 17.28 19.75 30.90 0.01 0.00 FBC 3 30.58 19.79 18.23 31.39 0.00 0.00 FBC 4 30.63 19.07 19.59 30.71 0.04 0.00 FBC 5 30.79 18.87 19.62 30.72 0.00 0.00 FBC 6 30.23 19.85 19.57 30.36 0.01 0.00 FBC 7 30.43 19.23 19.96 30.38 0.00 0.00 FBC 8 30.61 19.46 18.98 30.95 0.00 0.00 FBC 9 30.10 19.72 19.46 30.72 0.00 0.00 FBC 10 30.58 19.35 19.76 30.31 0.00 0.00 FBC 11 30.72 19.14 19.34 30.80 0.02 0.00 FBC 12 30.40 19.66 19.41 30.53 0.00 0.00 FBC 13 30.55 19.40 19.66 30.39 0.00 0.00 FBC 14 30.73 19.22 19.40 30.66 0.00 0.00 FBC 15 30.34 19.69 19.44 30.52 0.00 0.00 FBC 16 30.45 19.44 19.71 30.40 0.00 0.00 FBC 17 30.66 19.38 19.36 30.60 0.00 0.00 FBC 18 30.27 19.79 19.53 30.41 0.00 0.00 FBC 19 30.28 19.60 19.89 30.23 0.00 0.00 FBC 20 30.54 19.43 19.52 30.52 0.00 0.00 FBC 21 30.18 19.85 19.63 30.34 0.00 0.00 FBC 22 30.30 19.66 19.94 30.10 0.00 0.00 FBC 23 30.51 19.48 19.60 30.41 0.00 0.00 FBC 24 30.20 19.87 19.69 30.25 0.02 0.00 FBC 25 30.36 19.69 19.85 30.09 0.00 0.00 FBC 26 30.51 19.47 19.56 30.46 0.05 0.00 FBC 27 30.08 19.95 19.74 30.23 0.00 0.00 FBC 28 30.20 19.74 19.94 30.12 0.00 0.00 FBC 29 30.47 19.54 19.59 30.40 0.00 0.00 FBC 30 30.04 19.95 19.80 30.20 0.01 0.00 FBC 31 30.22 19.72 20.00 30.06 0.00 0.00 FBC 32 30.40 19.56 19.65 30.39 0.00 0.00 FBC 33 30.08 19.92 19.78 30.22 0.01 0.00 FBC 34 30.26 19.74 20.05 29.95 0.00 0.00 FBC 35 30.36 19.63 19.63 30.38 0.00 0.00 FBC 36 29.98 20.00 19.88 30.14 0.01 0.00 FBC 37 30.18 19.80 19.99 30.03 0.00 0.00 FBC 38 30.39 19.52 19.69 30.39 0.00 0.00 FBC 39 29.98 19.99 19.84 30.18 0.01 0.00 FBC 40 30.17 19.77 20.07 30.00 0.01 0.00 FBC 41 30.35 19.60 19.73 30.32 0.00 0.00 FBC 42 30.02 20.02 19.86 30.10 0.02 0.00 FBC 43 30.14 19.83 20.05 29.97 0.02 0.00 FBC 44 30.38 19.60 19.76 30.26 0.02 0.00 FBC 45 30.00 19.96 19.87 30.17 0.00 0.00 FBC 46 30.15 19.79 20.04 30.02 0.00 0.00 FBC 47 30.38 19.57 19.73 30.33 0.00 0.00 FBC 48 30.07 19.99 19.85 30.09 0.00 0.00 FBC 49 30.09 19.86 20.05 30.00 0.00 0.00 FBC 50 30.33 19.60 19.76 30.31 0.01 0.00 FBC 51 30.04 19.97 19.92 30.06 0.01 0.00 FBC 52 30.14 19.85 20.07 29.94 0.02 0.00 FBC 53 30.33 19.64 19.71 30.31 0.03 0.00 FBC 54 30.01 19.99 19.94 30.06 0.00 0.00 FBC 55 30.13 19.86 20.05 29.96 0.00 0.00 FBC 56 30.37 19.62 19.71 30.30 0.00 0.00 FBC 57 29.98 20.00 19.95 30.06 0.01 0.00 FBC 58 30.12 19.84 20.10 29.94 0.01 0.00 FBC 59 30.32 19.66 19.77 30.25 0.01 0.00 FBC 60 29.94 20.07 19.90 30.09 0.00 0.00 FBC 61 30.12 19.86 20.12 29.91 0.00 0.00 FBC 62 30.35 19.60 19.77 30.28 0.00 0.00 FBC 63 30.03 19.99 19.88 30.10 0.00 0.00 FBC 64 30.11 19.83 20.11 29.95 0.00 0.00 FBC 65 30.33 19.60 19.80 30.27 0.00 0.00 FBC 66 29.94 20.04 19.91 30.11 0.00 0.00 FBC 67 30.07 19.87 20.03 30.03 0.00 0.00 FBC 68 30.36 19.62 19.76 30.26 0.00 0.00 FBC 69 29.99 20.03 19.95 30.04 0.00 0.00 FBC 70 30.09 19.84 20.14 29.93 0.00 0.00 FBC 71 30.30 19.68 19.74 30.28 0.00 0.00 FBC 72 29.99 20.07 19.85 30.09 0.00 0.00 FBC 73 30.11 19.84 20.13 29.92 0.00 0.00 FBC 74 30.29 19.70 19.75 30.27 0.00 0.00 FBC 75 30.02 20.10 19.87 30.00 0.00 0.00 FBC 76 30.12 19.81 20.08 29.99 0.00 0.00 FBC 77 30.30 19.63 19.79 30.27 0.00 0.00 FBC 78 29.97 20.04 19.93 30.06 0.00 0.00 FBC 79 30.11 19.84 20.06 30.00 0.00 0.00 FBC 80 30.36 19.64 19.74 30.26 0.00 0.00 FBC 81 30.05 20.05 19.87 30.03 0.00 0.00 FBC 82 30.17 19.83 20.11 29.90 0.00 0.00 FBC 83 30.30 19.62 19.78 30.29 0.00 0.00 FBC 84 29.99 20.04 19.93 30.05 0.00 0.00 FBC 85 30.06 19.86 20.11 29.96 0.00 0.00 FBC 86 30.36 19.65 19.77 30.23 0.00 0.00 FBC 87 30.01 20.08 19.91 30.00 0.02 0.00 FBC 88 30.13 19.80 20.12 29.96 0.01 0.00 FBC 89 30.28 19.64 19.78 30.29 0.01 0.00 FBC 90 29.97 20.06 19.92 30.05 0.00 0.00 FBC 91 30.14 19.83 20.08 29.94 0.01 0.00 FBC 92 30.35 19.63 19.79 30.23 0.01 0.00 FBC 93 29.97 20.01 19.92 30.09 0.00 0.00 FBC 94 30.11 19.88 20.09 29.92 0.00 0.00 FBC 95 30.31 19.69 19.76 30.25 0.00 0.00 FBC 96 30.01 20.06 19.90 30.03 0.01 0.00 FBC 97 30.17 19.86 20.09 29.88 0.00 0.00 FBC 98 30.35 19.68 19.73 30.24 0.01 0.00 FBC 99 29.90 20.09 19.90 30.11 0.01 0.00 FBC 100 29.95 19.94 20.21 29.90 0.08 0.00 # ACGT raw counters for first fragments. Use `grep ^FTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters FTC 60515123 39449969 39641982 60380430 12496 # ACGT content per cycle for last fragments. Use `grep ^LBC | cut -f 2-` to extract this part. The columns are: cycle; A,C,G,T base counts as a percentage of all A/C/G/T bases [%]; and N and O counts as a percentage of all A/C/G/T bases [%] LBC 1 31.54 20.23 20.47 27.76 0.01 0.00 LBC 2 32.71 17.11 19.94 30.24 0.00 0.00 LBC 3 30.66 19.87 18.75 30.72 0.00 0.00 LBC 4 30.15 19.62 20.05 30.19 0.00 0.00 LBC 5 30.68 19.09 19.71 30.51 0.00 0.00 LBC 6 30.06 20.28 19.74 29.91 0.00 0.00 LBC 7 30.26 19.44 20.08 30.21 0.00 0.00 LBC 8 30.59 19.51 19.06 30.84 0.00 0.00 LBC 9 30.16 19.74 19.51 30.59 0.00 0.00 LBC 10 30.59 19.40 19.77 30.24 0.00 0.00 LBC 11 30.77 19.19 19.39 30.64 0.00 0.00 LBC 12 30.39 19.70 19.46 30.46 0.01 0.00 LBC 13 30.56 19.42 19.65 30.37 0.01 0.00 LBC 14 30.83 19.21 19.38 30.57 0.02 0.00 LBC 15 30.40 19.68 19.51 30.40 0.01 0.00 LBC 16 30.41 19.50 19.76 30.33 0.01 0.00 LBC 17 30.70 19.28 19.40 30.62 0.00 0.00 LBC 18 30.23 19.81 19.55 30.40 0.01 0.00 LBC 19 30.35 19.63 19.87 30.16 0.00 0.00 LBC 20 30.53 19.44 19.53 30.50 0.00 0.00 LBC 21 30.11 19.90 19.67 30.32 0.00 0.00 LBC 22 30.30 19.71 19.93 30.07 0.01 0.00 LBC 23 30.57 19.41 19.60 30.42 0.01 0.00 LBC 24 30.15 19.97 19.73 30.14 0.01 0.00 LBC 25 30.25 19.74 19.94 30.07 0.01 0.00 LBC 26 30.46 19.50 19.64 30.40 0.00 0.00 LBC 27 30.06 20.02 19.75 30.17 0.01 0.00 LBC 28 30.18 19.84 19.98 30.00 0.00 0.00 LBC 29 30.38 19.61 19.67 30.34 0.00 0.00 LBC 30 30.02 19.98 19.85 30.14 0.00 0.00 LBC 31 30.21 19.81 20.03 29.95 0.01 0.00 LBC 32 30.43 19.55 19.77 30.25 0.00 0.00 LBC 33 30.06 20.01 19.86 30.07 0.01 0.00 LBC 34 30.14 19.80 20.08 29.99 0.01 0.00 LBC 35 30.42 19.58 19.76 30.24 0.00 0.00 LBC 36 30.06 20.04 19.87 30.02 0.00 0.00 LBC 37 30.16 19.85 20.09 29.90 0.00 0.00 LBC 38 30.41 19.63 19.72 30.25 0.00 0.00 LBC 39 29.94 20.05 19.92 30.09 0.00 0.00 LBC 40 30.13 19.84 20.14 29.89 0.00 0.00 LBC 41 30.35 19.66 19.82 30.17 0.00 0.00 LBC 42 29.98 20.04 19.94 30.05 0.03 0.00 LBC 43 30.13 19.88 20.06 29.92 0.02 0.00 LBC 44 30.40 19.63 19.78 30.19 0.01 0.00 LBC 45 29.97 20.07 19.94 30.02 0.00 0.00 LBC 46 30.14 19.93 20.09 29.84 0.00 0.00 LBC 47 30.37 19.61 19.81 30.22 0.00 0.00 LBC 48 29.97 20.09 19.93 30.01 0.00 0.00 LBC 49 30.07 19.94 20.12 29.88 0.00 0.00 LBC 50 30.34 19.68 19.82 30.16 0.00 0.00 LBC 51 29.98 20.00 19.94 30.08 0.00 0.00 LBC 52 30.12 19.90 20.11 29.87 0.01 0.00 LBC 53 30.31 19.68 19.76 30.25 0.01 0.00 LBC 54 29.98 20.08 19.97 29.97 0.02 0.00 LBC 55 30.10 19.92 20.10 29.88 0.02 0.00 LBC 56 30.39 19.71 19.76 30.14 0.02 0.00 LBC 57 29.92 20.09 19.98 30.02 0.00 0.00 LBC 58 30.12 19.87 20.12 29.89 0.01 0.00 LBC 59 30.33 19.62 19.83 30.22 0.01 0.00 LBC 60 29.97 20.04 19.98 30.00 0.00 0.00 LBC 61 30.11 19.87 20.13 29.89 0.02 0.00 LBC 62 30.42 19.67 19.71 30.21 0.00 0.00 LBC 63 30.03 20.05 19.90 30.02 0.02 0.00 LBC 64 30.14 19.86 20.12 29.87 0.01 0.00 LBC 65 30.35 19.58 19.82 30.25 0.00 0.00 LBC 66 29.96 20.12 19.91 30.01 0.00 0.00 LBC 67 30.07 19.90 20.11 29.92 0.00 0.00 LBC 68 30.36 19.64 19.78 30.23 0.00 0.00 LBC 69 29.94 20.09 19.95 30.02 0.00 0.00 LBC 70 30.12 19.92 20.10 29.86 0.00 0.00 LBC 71 30.31 19.69 19.79 30.21 0.00 0.00 LBC 72 30.03 20.02 19.95 30.00 0.00 0.00 LBC 73 30.13 19.93 20.10 29.84 0.00 0.00 LBC 74 30.40 19.61 19.79 30.20 0.00 0.00 LBC 75 29.95 20.15 19.93 29.96 0.00 0.00 LBC 76 30.17 19.86 20.10 29.86 0.00 0.00 LBC 77 30.36 19.66 19.79 30.19 0.00 0.00 LBC 78 29.96 20.04 20.01 29.98 0.01 0.00 LBC 79 30.09 19.92 20.14 29.86 0.03 0.00 LBC 80 30.39 19.66 19.77 30.18 0.03 0.00 LBC 81 29.98 20.04 19.98 30.00 0.03 0.00 LBC 82 30.11 19.87 20.15 29.87 0.04 0.00 LBC 83 30.36 19.66 19.80 30.18 0.02 0.00 LBC 84 30.00 20.04 19.96 30.00 0.01 0.00 LBC 85 30.08 19.90 20.14 29.88 0.00 0.00 LBC 86 30.39 19.66 19.78 30.17 0.00 0.00 LBC 87 29.96 20.09 19.95 30.00 0.00 0.00 LBC 88 30.09 19.84 20.12 29.95 0.00 0.00 LBC 89 30.32 19.61 19.83 30.24 0.00 0.00 LBC 90 29.99 20.08 19.98 29.95 0.00 0.00 LBC 91 30.15 19.90 20.14 29.80 0.00 0.00 LBC 92 30.38 19.62 19.83 30.17 0.01 0.00 LBC 93 29.98 20.06 20.04 29.92 0.01 0.00 LBC 94 30.18 19.87 20.14 29.81 0.00 0.00 LBC 95 30.35 19.73 19.86 30.07 0.00 0.00 LBC 96 30.00 20.13 19.94 29.93 0.00 0.00 LBC 97 30.18 19.89 20.12 29.82 0.00 0.00 LBC 98 30.37 19.64 19.85 30.14 0.01 0.00 LBC 99 30.00 20.04 20.02 29.93 0.02 0.00 LBC 100 29.97 20.00 20.38 29.65 0.13 0.00 # ACGT raw counters for last fragments. Use `grep ^LTC | cut -f 2-` to extract this part. The columns are: A,C,G,T,N base counters LTC 60517194 39543842 39744036 60179860 15068 # Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: insert size, pairs total, inward oriented pairs, outward oriented pairs, other pairs IS 0 4 0 1 3 IS 1 0 0 0 0 IS 2 13 0 12 1 IS 3 11 0 11 0 IS 4 7 0 7 0 IS 5 10 0 10 0 IS 6 11 0 11 0 IS 7 4 0 4 0 IS 8 9 0 9 0 IS 9 14 0 13 1 IS 10 12 0 12 0 IS 11 14 0 14 0 IS 12 6 0 6 0 IS 13 10 0 10 0 IS 14 13 0 13 0 IS 15 16 0 16 0 IS 16 13 0 13 0 IS 17 16 0 16 0 IS 18 16 0 16 0 IS 19 192 77 115 0 IS 20 120 56 64 0 IS 21 70 36 34 0 IS 22 67 24 42 1 IS 23 34 12 21 1 IS 24 31 10 21 0 IS 25 43 19 23 1 IS 26 26 10 16 0 IS 27 34 12 22 0 IS 28 26 10 15 1 IS 29 16 8 7 1 IS 30 29 12 16 1 IS 31 19 5 13 1 IS 32 29 8 21 0 IS 33 25 12 13 0 IS 34 27 13 14 0 IS 35 30 8 21 1 IS 36 34 13 21 0 IS 37 22 5 16 1 IS 38 22 11 11 0 IS 39 20 7 13 0 IS 40 22 8 14 0 IS 41 27 11 16 0 IS 42 28 14 13 1 IS 43 15 7 8 0 IS 44 39 21 18 0 IS 45 22 12 10 0 IS 46 23 13 10 0 IS 47 25 11 14 0 IS 48 27 10 17 0 IS 49 31 14 16 1 IS 50 24 9 15 0 IS 51 28 7 21 0 IS 52 32 14 17 1 IS 53 31 17 13 1 IS 54 30 10 20 0 IS 55 53 30 23 0 IS 56 43 16 26 1 IS 57 30 13 15 2 IS 58 38 19 16 3 IS 59 35 12 23 0 IS 60 33 15 17 1 IS 61 37 16 21 0 IS 62 34 16 18 0 IS 63 26 11 14 1 IS 64 41 23 18 0 IS 65 47 15 31 1 IS 66 42 15 25 2 IS 67 31 17 14 0 IS 68 44 23 21 0 IS 69 43 18 25 0 IS 70 51 21 29 1 IS 71 52 24 26 2 IS 72 33 16 16 1 IS 73 48 17 30 1 IS 74 51 26 24 1 IS 75 23 10 13 0 IS 76 45 30 15 0 IS 77 32 22 9 1 IS 78 41 27 14 0 IS 79 62 34 28 0 IS 80 53 35 17 1 IS 81 50 31 18 1 IS 82 61 37 24 0 IS 83 49 25 22 2 IS 84 58 33 24 1 IS 85 40 13 26 1 IS 86 61 31 30 0 IS 87 55 34 21 0 IS 88 69 42 26 1 IS 89 53 36 17 0 IS 90 70 35 35 0 IS 91 67 32 34 1 IS 92 82 53 27 2 IS 93 77 54 22 1 IS 94 75 51 23 1 IS 95 60 35 25 0 IS 96 84 56 27 1 IS 97 87 55 32 0 IS 98 75 46 29 0 IS 99 69 47 21 1 IS 100 85 72 13 0 IS 101 79 76 2 1 IS 102 99 95 4 0 IS 103 91 88 3 0 IS 104 118 115 1 2 IS 105 101 100 0 1 IS 106 119 119 0 0 IS 107 104 102 1 1 IS 108 106 104 2 0 IS 109 115 113 2 0 IS 110 149 148 0 1 IS 111 118 117 0 1 IS 112 120 120 0 0 IS 113 118 118 0 0 IS 114 127 126 0 1 IS 115 129 129 0 0 IS 116 146 146 0 0 IS 117 160 159 1 0 IS 118 163 163 0 0 IS 119 185 184 0 1 IS 120 182 182 0 0 IS 121 206 206 0 0 IS 122 250 249 1 0 IS 123 230 230 0 0 IS 124 277 275 0 2 IS 125 319 317 1 1 IS 126 304 304 0 0 IS 127 373 372 0 1 IS 128 430 429 0 1 IS 129 412 411 1 0 IS 130 459 455 3 1 IS 131 465 465 0 0 IS 132 494 494 0 0 IS 133 566 565 1 0 IS 134 658 658 0 0 IS 135 699 698 0 1 IS 136 666 664 1 1 IS 137 792 790 0 2 IS 138 864 864 0 0 IS 139 956 956 0 0 IS 140 1006 1004 1 1 IS 141 1116 1115 0 1 IS 142 1188 1186 1 1 IS 143 1245 1244 1 0 IS 144 1350 1349 1 0 IS 145 1491 1489 2 0 IS 146 1553 1553 0 0 IS 147 1613 1613 0 0 IS 148 1792 1792 0 0 IS 149 1977 1976 0 1 IS 150 2075 2074 1 0 IS 151 2118 2117 1 0 IS 152 2404 2403 0 1 IS 153 2364 2363 1 0 IS 154 2533 2532 1 0 IS 155 2758 2757 1 0 IS 156 2937 2937 0 0 IS 157 3105 3104 0 1 IS 158 3060 3060 0 0 IS 159 3209 3208 0 1 IS 160 3512 3511 0 1 IS 161 3645 3644 0 1 IS 162 3834 3834 0 0 IS 163 3868 3868 0 0 IS 164 4169 4169 0 0 IS 165 4302 4302 0 0 IS 166 4417 4417 0 0 IS 167 4577 4577 0 0 IS 168 4776 4776 0 0 IS 169 4946 4945 0 1 IS 170 5016 5016 0 0 IS 171 5265 5265 0 0 IS 172 5409 5409 0 0 IS 173 5495 5493 0 2 IS 174 5598 5597 1 0 IS 175 5808 5806 0 2 IS 176 5786 5785 1 0 IS 177 5959 5959 0 0 IS 178 6140 6140 0 0 IS 179 6096 6095 0 1 IS 180 6390 6389 1 0 IS 181 6240 6240 0 0 IS 182 6577 6576 1 0 IS 183 6478 6478 0 0 IS 184 6666 6664 2 0 IS 185 6787 6787 0 0 IS 186 6845 6844 0 1 IS 187 6804 6802 0 2 IS 188 6897 6895 2 0 IS 189 6906 6906 0 0 IS 190 6936 6936 0 0 IS 191 6853 6853 0 0 IS 192 7119 7118 1 0 IS 193 7098 7097 0 1 IS 194 7236 7236 0 0 IS 195 7217 7217 0 0 IS 196 7133 7133 0 0 IS 197 7149 7146 2 1 IS 198 7354 7353 1 0 IS 199 7242 7240 2 0 IS 200 7263 7262 0 1 IS 201 7378 7378 0 0 IS 202 7412 7412 0 0 IS 203 7258 7257 1 0 IS 204 7148 7147 1 0 IS 205 7079 7079 0 0 IS 206 7094 7094 0 0 IS 207 7150 7150 0 0 IS 208 7232 7231 0 1 IS 209 7083 7080 1 2 IS 210 7089 7089 0 0 IS 211 7070 7070 0 0 IS 212 7140 7140 0 0 IS 213 7119 7118 0 1 IS 214 6995 6995 0 0 IS 215 6880 6879 0 1 IS 216 6824 6823 1 0 IS 217 6738 6738 0 0 IS 218 6605 6605 0 0 IS 219 6764 6764 0 0 IS 220 6734 6733 1 0 IS 221 6634 6632 2 0 IS 222 6661 6661 0 0 IS 223 6563 6563 0 0 IS 224 6395 6395 0 0 IS 225 6613 6612 1 0 IS 226 6504 6503 1 0 IS 227 6187 6186 0 1 IS 228 6320 6320 0 0 IS 229 6185 6183 1 1 IS 230 6096 6095 1 0 IS 231 6260 6260 0 0 IS 232 5967 5967 0 0 IS 233 6033 6033 0 0 IS 234 6062 6062 0 0 IS 235 6003 6003 0 0 IS 236 5833 5832 1 0 IS 237 5727 5726 0 1 IS 238 5676 5676 0 0 IS 239 5844 5844 0 0 IS 240 5672 5672 0 0 IS 241 5621 5621 0 0 IS 242 5449 5448 1 0 IS 243 5602 5602 0 0 IS 244 5350 5350 0 0 IS 245 5270 5269 1 0 IS 246 5237 5237 0 0 IS 247 5210 5210 0 0 IS 248 5122 5122 0 0 IS 249 4992 4991 1 0 IS 250 5004 5004 0 0 IS 251 4919 4919 0 0 IS 252 4882 4882 0 0 IS 253 4850 4849 1 0 IS 254 4842 4841 1 0 IS 255 4593 4593 0 0 IS 256 4732 4732 0 0 IS 257 4636 4635 1 0 IS 258 4625 4622 3 0 IS 259 4537 4537 0 0 IS 260 4376 4376 0 0 IS 261 4491 4491 0 0 IS 262 4472 4472 0 0 IS 263 4292 4292 0 0 IS 264 4228 4227 1 0 IS 265 4176 4176 0 0 IS 266 4152 4152 0 0 IS 267 4093 4093 0 0 IS 268 4143 4143 0 0 IS 269 3961 3961 0 0 IS 270 3861 3860 1 0 IS 271 3870 3870 0 0 IS 272 3954 3954 0 0 IS 273 3786 3786 0 0 IS 274 3785 3785 0 0 IS 275 3785 3782 2 1 IS 276 3661 3661 0 0 IS 277 3647 3647 0 0 IS 278 3467 3467 0 0 IS 279 3545 3543 2 0 IS 280 3401 3401 0 0 IS 281 3446 3446 0 0 IS 282 3412 3411 0 1 IS 283 3354 3353 1 0 IS 284 3326 3325 1 0 IS 285 3201 3200 0 1 IS 286 3182 3181 1 0 IS 287 3143 3143 0 0 IS 288 3138 3136 2 0 IS 289 3074 3074 0 0 IS 290 3108 3108 0 0 IS 291 3015 3015 0 0 IS 292 3004 3004 0 0 IS 293 2918 2917 1 0 IS 294 2817 2817 0 0 IS 295 2815 2814 0 1 IS 296 2815 2815 0 0 IS 297 2815 2814 1 0 IS 298 2740 2740 0 0 IS 299 2752 2752 0 0 IS 300 2649 2648 1 0 IS 301 2644 2644 0 0 IS 302 2558 2558 0 0 IS 303 2489 2489 0 0 IS 304 2563 2563 0 0 IS 305 2480 2480 0 0 IS 306 2484 2483 1 0 IS 307 2412 2411 1 0 IS 308 2350 2350 0 0 IS 309 2334 2333 1 0 IS 310 2222 2220 2 0 IS 311 2244 2244 0 0 IS 312 2320 2320 0 0 IS 313 2183 2183 0 0 IS 314 2182 2182 0 0 IS 315 2197 2196 1 0 IS 316 2066 2065 1 0 IS 317 2080 2080 0 0 IS 318 2024 2024 0 0 IS 319 2031 2030 1 0 IS 320 2037 2035 2 0 IS 321 1980 1980 0 0 IS 322 1851 1849 2 0 IS 323 1878 1878 0 0 IS 324 1866 1865 1 0 IS 325 1894 1894 0 0 IS 326 1824 1823 1 0 IS 327 1774 1774 0 0 IS 328 1738 1737 1 0 IS 329 1720 1720 0 0 IS 330 1737 1736 1 0 IS 331 1687 1687 0 0 IS 332 1713 1713 0 0 IS 333 1632 1630 2 0 IS 334 1690 1689 1 0 IS 335 1641 1640 1 0 IS 336 1547 1547 0 0 IS 337 1544 1544 0 0 IS 338 1611 1611 0 0 IS 339 1502 1501 1 0 IS 340 1421 1421 0 0 IS 341 1469 1469 0 0 IS 342 1422 1422 0 0 IS 343 1419 1419 0 0 IS 344 1389 1388 1 0 IS 345 1421 1420 1 0 IS 346 1378 1378 0 0 IS 347 1311 1311 0 0 IS 348 1325 1325 0 0 IS 349 1348 1348 0 0 IS 350 1279 1278 1 0 IS 351 1294 1294 0 0 IS 352 1228 1228 0 0 IS 353 1194 1194 0 0 IS 354 1198 1198 0 0 IS 355 1185 1185 0 0 IS 356 1153 1153 0 0 IS 357 1202 1202 0 0 IS 358 1142 1142 0 0 IS 359 1103 1103 0 0 IS 360 1087 1087 0 0 IS 361 1106 1105 1 0 IS 362 1088 1087 1 0 IS 363 1057 1057 0 0 IS 364 1028 1028 0 0 IS 365 943 943 0 0 IS 366 1001 1001 0 0 IS 367 1000 999 1 0 IS 368 968 968 0 0 IS 369 1006 1004 1 1 IS 370 955 955 0 0 IS 371 906 906 0 0 IS 372 887 886 1 0 IS 373 933 932 1 0 IS 374 904 904 0 0 IS 375 900 900 0 0 IS 376 860 860 0 0 IS 377 822 822 0 0 IS 378 812 812 0 0 IS 379 825 825 0 0 IS 380 863 863 0 0 IS 381 768 768 0 0 IS 382 805 805 0 0 IS 383 754 754 0 0 IS 384 768 767 1 0 IS 385 800 799 1 0 IS 386 745 744 1 0 IS 387 689 689 0 0 IS 388 734 734 0 0 IS 389 707 706 1 0 IS 390 681 681 0 0 IS 391 606 604 2 0 IS 392 704 704 0 0 IS 393 702 702 0 0 IS 394 607 607 0 0 IS 395 647 647 0 0 IS 396 647 647 0 0 IS 397 559 557 2 0 IS 398 597 596 1 0 IS 399 578 577 1 0 IS 400 607 606 1 0 IS 401 555 555 0 0 IS 402 549 549 0 0 IS 403 524 524 0 0 IS 404 568 568 0 0 IS 405 567 566 1 0 IS 406 524 524 0 0 IS 407 528 528 0 0 IS 408 521 521 0 0 IS 409 519 518 1 0 IS 410 477 476 1 0 IS 411 487 487 0 0 IS 412 510 509 1 0 IS 413 454 453 1 0 IS 414 481 481 0 0 IS 415 491 491 0 0 IS 416 455 455 0 0 IS 417 452 451 1 0 IS 418 466 466 0 0 IS 419 477 477 0 0 IS 420 443 443 0 0 IS 421 409 409 0 0 IS 422 410 409 1 0 IS 423 408 407 1 0 IS 424 377 376 1 0 IS 425 386 384 2 0 IS 426 387 387 0 0 IS 427 354 353 1 0 IS 428 366 366 0 0 IS 429 378 378 0 0 IS 430 398 398 0 0 IS 431 354 353 1 0 IS 432 336 336 0 0 IS 433 365 365 0 0 IS 434 330 330 0 0 IS 435 342 340 2 0 IS 436 332 332 0 0 IS 437 281 281 0 0 IS 438 330 330 0 0 IS 439 306 306 0 0 IS 440 306 305 1 0 IS 441 299 299 0 0 IS 442 302 301 1 0 IS 443 267 266 1 0 IS 444 303 303 0 0 IS 445 284 283 1 0 IS 446 272 272 0 0 IS 447 283 282 1 0 IS 448 280 280 0 0 IS 449 247 246 1 0 IS 450 269 268 1 0 IS 451 261 261 0 0 IS 452 256 254 2 0 IS 453 254 254 0 0 IS 454 251 250 1 0 IS 455 216 216 0 0 IS 456 231 230 1 0 IS 457 237 237 0 0 IS 458 210 210 0 0 IS 459 228 227 1 0 IS 460 241 240 1 0 IS 461 244 243 1 0 IS 462 206 206 0 0 IS 463 239 239 0 0 IS 464 209 209 0 0 IS 465 201 200 1 0 IS 466 202 202 0 0 IS 467 193 193 0 0 IS 468 201 200 1 0 IS 469 208 208 0 0 IS 470 176 175 1 0 IS 471 195 195 0 0 IS 472 169 169 0 0 IS 473 185 185 0 0 IS 474 180 179 0 1 IS 475 165 165 0 0 IS 476 160 160 0 0 IS 477 157 157 0 0 IS 478 165 165 0 0 IS 479 157 157 0 0 IS 480 154 154 0 0 IS 481 161 159 2 0 IS 482 162 162 0 0 IS 483 143 143 0 0 IS 484 158 158 0 0 IS 485 158 158 0 0 IS 486 155 155 0 0 IS 487 119 119 0 0 IS 488 126 126 0 0 IS 489 151 151 0 0 IS 490 146 146 0 0 IS 491 133 130 3 0 IS 492 134 134 0 0 IS 493 119 119 0 0 IS 494 102 101 1 0 IS 495 127 126 1 0 IS 496 121 118 3 0 IS 497 120 120 0 0 IS 498 102 102 0 0 IS 499 104 104 0 0 IS 500 103 103 0 0 IS 501 112 112 0 0 IS 502 101 101 0 0 IS 503 119 118 1 0 IS 504 95 95 0 0 IS 505 94 94 0 0 IS 506 96 96 0 0 IS 507 97 97 0 0 IS 508 91 91 0 0 IS 509 95 95 0 0 IS 510 100 100 0 0 IS 511 93 93 0 0 IS 512 116 114 2 0 IS 513 79 79 0 0 IS 514 80 80 0 0 IS 515 85 85 0 0 IS 516 91 91 0 0 IS 517 88 87 1 0 IS 518 85 84 1 0 IS 519 86 85 1 0 IS 520 82 82 0 0 IS 521 74 73 1 0 IS 522 67 66 1 0 IS 523 81 81 0 0 IS 524 65 65 0 0 IS 525 82 82 0 0 IS 526 58 58 0 0 IS 527 69 69 0 0 # Read lengths. Use `grep ^RL | cut -f 2-` to extract this part. The columns are: read length, count RL 100 4000000 # Read lengths - first fragments. Use `grep ^FRL | cut -f 2-` to extract this part. The columns are: read length, count FRL 100 2000000 # Read lengths - last fragments. Use `grep ^LRL | cut -f 2-` to extract this part. The columns are: read length, count LRL 100 2000000 # Indel distribution. Use `grep ^ID | cut -f 2-` to extract this part. The columns are: length, number of insertions, number of deletions ID 1 23663 32440 ID 2 12870 16390 ID 3 7188 8695 ID 4 5106 6544 ID 5 1720 1751 ID 6 4075 5767 ID 7 567 703 ID 8 1449 2629 ID 9 1249 1879 ID 10 728 1753 ID 11 132 214 ID 12 904 2342 ID 13 54 139 ID 14 195 867 ID 15 218 610 ID 16 106 568 ID 17 12 69 ID 18 155 730 ID 19 8 62 ID 20 40 304 ID 21 29 280 ID 22 6 182 ID 23 1 25 ID 24 13 246 ID 25 1 21 ID 26 2 80 ID 27 2 57 ID 28 1 36 ID 29 0 3 ID 30 0 29 ID 31 0 1 ID 32 0 17 ID 33 0 4 ID 34 0 5 ID 36 0 10 # Indels per cycle. Use `grep ^IC | cut -f 2-` to extract this part. The columns are: cycle, number of insertions (fwd), .. (rev) , number of deletions (fwd), .. (rev) IC 3 0 0 153 171 IC 4 128 109 159 173 IC 5 158 161 196 181 IC 6 182 171 227 229 IC 7 190 180 228 229 IC 8 170 182 283 256 IC 9 217 189 300 293 IC 10 244 239 305 281 IC 11 242 279 335 316 IC 12 295 222 327 313 IC 13 261 240 334 324 IC 14 294 319 326 341 IC 15 246 283 390 379 IC 16 282 300 385 349 IC 17 279 295 382 357 IC 18 341 316 386 356 IC 19 336 331 376 434 IC 20 335 327 448 441 IC 21 368 338 409 431 IC 22 351 366 422 495 IC 23 385 396 493 463 IC 24 355 387 477 464 IC 25 394 369 484 461 IC 26 429 380 576 500 IC 27 428 396 500 518 IC 28 417 409 578 530 IC 29 441 442 537 541 IC 30 445 428 572 542 IC 31 483 394 590 545 IC 32 430 430 579 556 IC 33 450 439 573 527 IC 34 471 451 609 529 IC 35 463 432 616 553 IC 36 474 400 603 579 IC 37 491 456 619 539 IC 38 460 425 611 592 IC 39 498 455 661 526 IC 40 499 405 655 567 IC 41 478 438 608 578 IC 42 442 458 609 585 IC 43 446 421 659 520 IC 44 456 427 628 547 IC 45 441 387 614 612 IC 46 451 429 617 625 IC 47 457 472 632 586 IC 48 436 440 644 570 IC 49 448 423 654 563 IC 50 439 400 617 580 IC 51 470 394 612 578 IC 52 406 417 574 598 IC 53 437 403 619 547 IC 54 431 392 599 545 IC 55 404 388 626 539 IC 56 452 360 570 563 IC 57 410 384 603 553 IC 58 404 404 579 545 IC 59 407 402 591 537 IC 60 391 359 563 562 IC 61 404 354 552 543 IC 62 394 379 605 547 IC 63 415 394 600 544 IC 64 369 386 579 538 IC 65 341 347 572 500 IC 66 365 320 545 507 IC 67 355 344 577 491 IC 68 389 330 532 491 IC 69 381 304 523 497 IC 70 366 318 465 460 IC 71 346 290 473 449 IC 72 369 319 495 443 IC 73 300 301 478 440 IC 74 305 268 483 463 IC 75 313 288 427 430 IC 76 291 265 462 397 IC 77 294 248 433 376 IC 78 261 267 438 407 IC 79 268 224 383 358 IC 80 248 243 422 375 IC 81 227 223 388 366 IC 82 256 219 384 317 IC 83 215 206 387 348 IC 84 224 183 360 335 IC 85 224 178 316 351 IC 86 198 201 320 325 IC 87 200 214 347 295 IC 88 168 152 314 297 IC 89 146 109 317 263 IC 90 136 129 302 259 IC 91 131 144 269 265 IC 92 130 124 277 265 IC 93 124 91 232 226 IC 94 110 87 263 236 IC 95 100 84 273 252 IC 96 105 87 243 237 IC 97 101 128 180 206 IC 98 0 0 0 1 # Coverage distribution. Use `grep ^COV | cut -f 2-` to extract this part. COV [1-1] 1 1150951 COV [2-2] 2 1319617 COV [3-3] 3 1417680 COV [4-4] 4 1456008 COV [5-5] 5 1462893 COV [6-6] 6 1464000 COV [7-7] 7 1479508 COV [8-8] 8 1500315 COV [9-9] 9 1509678 COV [10-10] 10 1493226 COV [11-11] 11 1424640 COV [12-12] 12 1309753 COV [13-13] 13 1160685 COV [14-14] 14 986795 COV [15-15] 15 796811 COV [16-16] 16 623566 COV [17-17] 17 465722 COV [18-18] 18 335341 COV [19-19] 19 236258 COV [20-20] 20 163709 COV [21-21] 21 111821 COV [22-22] 22 76531 COV [23-23] 23 53823 COV [24-24] 24 38919 COV [25-25] 25 28743 COV [26-26] 26 22658 COV [27-27] 27 19566 COV [28-28] 28 16412 COV [29-29] 29 14656 COV [30-30] 30 13337 COV [31-31] 31 11545 COV [32-32] 32 10301 COV [33-33] 33 9452 COV [34-34] 34 8959 COV [35-35] 35 7883 COV [36-36] 36 7321 COV [37-37] 37 6924 COV [38-38] 38 6174 COV [39-39] 39 5606 COV [40-40] 40 5528 COV [41-41] 41 5044 COV [42-42] 42 4442 COV [43-43] 43 4349 COV [44-44] 44 4071 COV [45-45] 45 3725 COV [46-46] 46 3614 COV [47-47] 47 3213 COV [48-48] 48 2974 COV [49-49] 49 2843 COV [50-50] 50 2633 COV [51-51] 51 2275 COV [52-52] 52 2201 COV [53-53] 53 1942 COV [54-54] 54 1838 COV [55-55] 55 1690 COV [56-56] 56 1510 COV [57-57] 57 1419 COV [58-58] 58 1417 COV [59-59] 59 1387 COV [60-60] 60 1278 COV [61-61] 61 1213 COV [62-62] 62 1212 COV [63-63] 63 1093 COV [64-64] 64 907 COV [65-65] 65 928 COV [66-66] 66 882 COV [67-67] 67 775 COV [68-68] 68 801 COV [69-69] 69 758 COV [70-70] 70 664 COV [71-71] 71 777 COV [72-72] 72 787 COV [73-73] 73 674 COV [74-74] 74 632 COV [75-75] 75 623 COV [76-76] 76 528 COV [77-77] 77 487 COV [78-78] 78 408 COV [79-79] 79 401 COV [80-80] 80 409 COV [81-81] 81 408 COV [82-82] 82 411 COV [83-83] 83 364 COV [84-84] 84 327 COV [85-85] 85 325 COV [86-86] 86 323 COV [87-87] 87 303 COV [88-88] 88 256 COV [89-89] 89 286 COV [90-90] 90 229 COV [91-91] 91 258 COV [92-92] 92 233 COV [93-93] 93 207 COV [94-94] 94 211 COV [95-95] 95 232 COV [96-96] 96 167 COV [97-97] 97 203 COV [98-98] 98 191 COV [99-99] 99 159 COV [100-100] 100 168 COV [101-101] 101 180 COV [102-102] 102 156 COV [103-103] 103 126 COV [104-104] 104 151 COV [105-105] 105 168 COV [106-106] 106 148 COV [107-107] 107 138 COV [108-108] 108 112 COV [109-109] 109 85 COV [110-110] 110 89 COV [111-111] 111 98 COV [112-112] 112 152 COV [113-113] 113 139 COV [114-114] 114 116 COV [115-115] 115 110 COV [116-116] 116 111 COV [117-117] 117 76 COV [118-118] 118 78 COV [119-119] 119 98 COV [120-120] 120 77 COV [121-121] 121 88 COV [122-122] 122 61 COV [123-123] 123 78 COV [124-124] 124 55 COV [125-125] 125 59 COV [126-126] 126 48 COV [127-127] 127 41 COV [128-128] 128 47 COV [129-129] 129 40 COV [130-130] 130 44 COV [131-131] 131 31 COV [132-132] 132 47 COV [133-133] 133 31 COV [134-134] 134 38 COV [135-135] 135 33 COV [136-136] 136 34 COV [137-137] 137 53 COV [138-138] 138 28 COV [139-139] 139 60 COV [140-140] 140 38 COV [141-141] 141 24 COV [142-142] 142 38 COV [143-143] 143 41 COV [144-144] 144 43 COV [145-145] 145 38 COV [146-146] 146 58 COV [147-147] 147 63 COV [148-148] 148 42 COV [149-149] 149 31 COV [150-150] 150 29 COV [151-151] 151 21 COV [152-152] 152 25 COV [153-153] 153 31 COV [154-154] 154 14 COV [155-155] 155 19 COV [156-156] 156 19 COV [157-157] 157 27 COV [158-158] 158 31 COV [159-159] 159 36 COV [160-160] 160 29 COV [161-161] 161 24 COV [162-162] 162 18 COV [163-163] 163 31 COV [164-164] 164 24 COV [165-165] 165 13 COV [166-166] 166 12 COV [167-167] 167 15 COV [168-168] 168 18 COV [169-169] 169 11 COV [170-170] 170 20 COV [171-171] 171 24 COV [172-172] 172 25 COV [173-173] 173 20 COV [174-174] 174 15 COV [175-175] 175 11 COV [176-176] 176 17 COV [177-177] 177 13 COV [178-178] 178 7 COV [179-179] 179 16 COV [180-180] 180 7 COV [181-181] 181 13 COV [182-182] 182 12 COV [183-183] 183 18 COV [184-184] 184 15 COV [185-185] 185 16 COV [186-186] 186 14 COV [187-187] 187 12 COV [188-188] 188 14 COV [189-189] 189 17 COV [190-190] 190 5 COV [191-191] 191 15 COV [192-192] 192 11 COV [193-193] 193 5 COV [194-194] 194 14 COV [195-195] 195 15 COV [196-196] 196 14 COV [197-197] 197 21 COV [198-198] 198 18 COV [199-199] 199 20 COV [200-200] 200 28 COV [201-201] 201 16 COV [202-202] 202 20 COV [203-203] 203 21 COV [204-204] 204 18 COV [205-205] 205 37 COV [206-206] 206 23 COV [207-207] 207 32 COV [208-208] 208 37 COV [209-209] 209 38 COV [210-210] 210 46 COV [211-211] 211 43 COV [212-212] 212 52 COV [213-213] 213 62 COV [214-214] 214 52 COV [215-215] 215 48 COV [216-216] 216 43 COV [217-217] 217 41 COV [218-218] 218 54 COV [219-219] 219 38 COV [220-220] 220 54 COV [221-221] 221 41 COV [222-222] 222 43 COV [223-223] 223 43 COV [224-224] 224 42 COV [225-225] 225 30 COV [226-226] 226 59 COV [227-227] 227 60 COV [228-228] 228 62 COV [229-229] 229 78 COV [230-230] 230 79 COV [231-231] 231 94 COV [232-232] 232 85 COV [233-233] 233 90 COV [234-234] 234 118 COV [235-235] 235 103 COV [236-236] 236 113 COV [237-237] 237 92 COV [238-238] 238 123 COV [239-239] 239 114 COV [240-240] 240 119 COV [241-241] 241 132 COV [242-242] 242 96 COV [243-243] 243 119 COV [244-244] 244 115 COV [245-245] 245 93 COV [246-246] 246 114 COV [247-247] 247 103 COV [248-248] 248 90 COV [249-249] 249 94 COV [250-250] 250 100 COV [251-251] 251 102 COV [252-252] 252 110 COV [253-253] 253 106 COV [254-254] 254 112 COV [255-255] 255 91 COV [256-256] 256 94 COV [257-257] 257 85 COV [258-258] 258 94 COV [259-259] 259 73 COV [260-260] 260 72 COV [261-261] 261 69 COV [262-262] 262 87 COV [263-263] 263 91 COV [264-264] 264 60 COV [265-265] 265 65 COV [266-266] 266 65 COV [267-267] 267 60 COV [268-268] 268 53 COV [269-269] 269 78 COV [270-270] 270 80 COV [271-271] 271 63 COV [272-272] 272 68 COV [273-273] 273 72 COV [274-274] 274 69 COV [275-275] 275 65 COV [276-276] 276 59 COV [277-277] 277 43 COV [278-278] 278 49 COV [279-279] 279 71 COV [280-280] 280 57 COV [281-281] 281 63 COV [282-282] 282 54 COV [283-283] 283 52 COV [284-284] 284 49 COV [285-285] 285 60 COV [286-286] 286 30 COV [287-287] 287 34 COV [288-288] 288 34 COV [289-289] 289 26 COV [290-290] 290 23 COV [291-291] 291 34 COV [292-292] 292 24 COV [293-293] 293 36 COV [294-294] 294 32 COV [295-295] 295 32 COV [296-296] 296 30 COV [297-297] 297 17 COV [298-298] 298 20 COV [299-299] 299 27 COV [300-300] 300 15 COV [301-301] 301 21 COV [302-302] 302 13 COV [303-303] 303 12 COV [304-304] 304 11 COV [305-305] 305 3 COV [306-306] 306 6 COV [307-307] 307 5 COV [308-308] 308 10 COV [309-309] 309 1 COV [310-310] 310 5 COV [311-311] 311 3 COV [312-312] 312 2 COV [313-313] 313 1 COV [314-314] 314 1 COV [315-315] 315 3 COV [317-317] 317 4 COV [318-318] 318 4 COV [320-320] 320 1 COV [322-322] 322 1 COV [323-323] 323 1 COV [324-324] 324 1 COV [327-327] 327 1 COV [329-329] 329 1 COV [336-336] 336 1 COV [337-337] 337 1 COV [339-339] 339 1 COV [340-340] 340 1 COV [342-342] 342 1 COV [344-344] 344 1 COV [347-347] 347 2 COV [349-349] 349 1 COV [354-354] 354 1 COV [358-358] 358 1 COV [359-359] 359 1 COV [362-362] 362 1 COV [363-363] 363 2 COV [369-369] 369 1 COV [370-370] 370 2 COV [372-372] 372 2 COV [373-373] 373 3 COV [376-376] 376 3 COV [377-377] 377 1 COV [378-378] 378 3 COV [380-380] 380 1 COV [381-381] 381 10 COV [382-382] 382 3 COV [395-395] 395 1 COV [396-396] 396 1 COV [402-402] 402 1 COV [411-411] 411 1 COV [417-417] 417 1 COV [422-422] 422 1 COV [428-428] 428 1 COV [431-431] 431 1 COV [433-433] 433 1 COV [445-445] 445 1 COV [450-450] 450 1 COV [459-459] 459 1 COV [461-461] 461 1 COV [471-471] 471 2 COV [474-474] 474 1 COV [482-482] 482 1 COV [494-494] 494 1 COV [495-495] 495 1 COV [496-496] 496 1 COV [501-501] 501 1 COV [508-508] 508 1 COV [515-515] 515 1 COV [517-517] 517 1 COV [519-519] 519 1 COV [520-520] 520 1 COV [528-528] 528 1 COV [530-530] 530 1 COV [539-539] 539 1 COV [543-543] 543 1 COV [545-545] 545 1 COV [547-547] 547 1 COV [549-549] 549 1 COV [550-550] 550 1 COV [553-553] 553 1 COV [558-558] 558 1 COV [561-561] 561 1 COV [563-563] 563 2 COV [564-564] 564 3 COV [565-565] 565 17 COV [569-569] 569 1 COV [576-576] 576 1 COV [586-586] 586 1 COV [595-595] 595 1 COV [597-597] 597 1 COV [603-603] 603 1 COV [608-608] 608 1 COV [615-615] 615 1 COV [623-623] 623 1 COV [624-624] 624 1 COV [631-631] 631 1 COV [633-633] 633 1 COV [638-638] 638 1 COV [639-639] 639 1 COV [643-643] 643 1 COV [647-647] 647 1 COV [648-648] 648 1 COV [649-649] 649 1 COV [658-658] 658 2 COV [662-662] 662 1 COV [664-664] 664 1 COV [667-667] 667 1 COV [670-670] 670 3 COV [671-671] 671 1 COV [672-672] 672 1 COV [673-673] 673 2 COV [676-676] 676 1 COV [679-679] 679 1 COV [685-685] 685 1 COV [690-690] 690 1 COV [693-693] 693 1 COV [694-694] 694 1 COV [699-699] 699 1 COV [701-701] 701 1 COV [706-706] 706 1 COV [709-709] 709 1 COV [713-713] 713 1 COV [717-717] 717 1 COV [721-721] 721 1 COV [722-722] 722 1 COV [724-724] 724 2 COV [726-726] 726 1 COV [727-727] 727 1 COV [728-728] 728 2 COV [729-729] 729 2 # GC-depth. Use `grep ^GCD | cut -f 2-` to extract this part. The columns are: GC%, unique sequence percentiles, 10th, 25th, 50th, 75th and 90th depth percentile GCD 0.0 0.170 0.000 0.000 0.000 0.000 0.000 GCD 14.0 0.340 4.890 4.890 6.693 8.495 8.495 GCD 16.0 0.595 6.605 6.605 11.470 12.805 12.805 GCD 17.0 1.276 6.380 7.326 7.713 8.448 9.095 GCD 18.0 5.102 6.251 6.945 7.730 8.445 9.366 GCD 19.0 20.238 6.604 7.488 8.180 9.123 9.724 GCD 20.0 48.044 7.150 7.790 8.495 9.370 10.008 GCD 21.0 74.320 7.440 8.085 8.775 9.480 10.425 GCD 22.0 85.884 7.670 8.326 8.967 9.814 10.501 GCD 23.0 90.986 7.806 8.424 9.208 10.181 10.869 GCD 24.0 92.602 8.070 8.720 9.675 10.745 11.375 GCD 25.0 93.707 8.463 9.230 9.870 11.960 13.239 GCD 26.0 94.813 6.198 8.943 10.120 18.930 22.780 GCD 27.0 95.833 7.207 9.483 13.677 20.108 23.535 GCD 28.0 97.194 4.670 10.046 11.243 18.554 21.058 GCD 29.0 98.724 8.800 11.501 16.305 20.421 22.971 GCD 31.0 99.065 8.625 9.025 14.960 61.639 75.620 GCD 32.0 99.235 1.725 1.725 5.970 10.215 10.215 GCD 33.0 99.405 4.015 4.015 4.887 5.760 5.760 GCD 34.0 99.490 11.020 11.020 11.020 11.020 11.020 GCD 35.0 99.575 12.860 12.860 12.860 12.860 12.860 GCD 37.0 99.660 0.280 0.280 0.280 0.280 0.280 GCD 45.0 99.745 8.380 8.380 8.380 8.380 8.380 GCD 46.0 99.830 0.020 0.020 0.020 0.020 0.020 GCD 47.0 100.000 0.155 0.155 0.887 1.620 1.620