Morning session: basic next-generation sequence data analysis
In this tutorial we will demonstrate a basic pipeline for analysing paired-end short-read genomic sequencing data. We will start with raw data in a FASTQ file, inspect quality control metrics, align the data, and then use it to look for genetic variation.
To get started, go to and get the prerequisites.
Contributors
- Gavin Band
- Matthieu Miossec
- Annie Forster